Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.59■□□□□ 0.41
CPSF7Q8N684 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPSF7Q8N684 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CPSF7Q8N684 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.58■□□□□ 0.41
CPSF7Q8N684 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPSF7Q8N684 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.58■□□□□ 0.41
CPSF7Q8N684 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CPSF7Q8N684 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.58■□□□□ 0.41
CPSF7Q8N684 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
CPSF7Q8N684 AC009102.3-201ENST00000623118 1491 ntBASIC17.58■□□□□ 0.41
CPSF7Q8N684 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.58■□□□□ 0.4
CPSF7Q8N684 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPSF7Q8N684 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPSF7Q8N684 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPSF7Q8N684 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPSF7Q8N684 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPSF7Q8N684 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CPSF7Q8N684 MIR149-201ENST00000384879 89 ntBASIC17.58■□□□□ 0.4
CPSF7Q8N684 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.58■□□□□ 0.4
CPSF7Q8N684 ATP5G1P1-201ENST00000448724 379 ntBASIC17.58■□□□□ 0.4
CPSF7Q8N684 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CPSF7Q8N684 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.58■□□□□ 0.4
CPSF7Q8N684 KRT18P35-201ENST00000510488 1269 ntBASIC17.58■□□□□ 0.4
CPSF7Q8N684 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.58■□□□□ 0.4
CPSF7Q8N684 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CPSF7Q8N684 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.58■□□□□ 0.4
CPSF7Q8N684 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.58■□□□□ 0.4
CPSF7Q8N684 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPSF7Q8N684 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CPSF7Q8N684 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CPSF7Q8N684 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.58■□□□□ 0.4
CPSF7Q8N684 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.58■□□□□ 0.4
CPSF7Q8N684 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.58■□□□□ 0.4
CPSF7Q8N684 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPSF7Q8N684 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPSF7Q8N684 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPSF7Q8N684 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
CPSF7Q8N684 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPSF7Q8N684 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPSF7Q8N684 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPSF7Q8N684 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPSF7Q8N684 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.57■□□□□ 0.4
CPSF7Q8N684 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
CPSF7Q8N684 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPSF7Q8N684 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CPSF7Q8N684 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPSF7Q8N684 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPSF7Q8N684 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.57■□□□□ 0.4
CPSF7Q8N684 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CPSF7Q8N684 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.57■□□□□ 0.4
CPSF7Q8N684 MCCD1P1-208ENST00000445732 328 ntBASIC17.57■□□□□ 0.4
CPSF7Q8N684 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPSF7Q8N684 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPSF7Q8N684 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CPSF7Q8N684 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.57■□□□□ 0.4
CPSF7Q8N684 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.57■□□□□ 0.4
CPSF7Q8N684 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.57■□□□□ 0.4
CPSF7Q8N684 FAM87A-204ENST00000613235 858 ntBASIC17.57■□□□□ 0.4
CPSF7Q8N684 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPSF7Q8N684 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPSF7Q8N684 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.57■□□□□ 0.4
CPSF7Q8N684 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPSF7Q8N684 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPSF7Q8N684 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPSF7Q8N684 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.57■□□□□ 0.4
CPSF7Q8N684 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPSF7Q8N684 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPSF7Q8N684 AL121761.2-201ENST00000598007 1648 ntBASIC17.57■□□□□ 0.4
CPSF7Q8N684 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPSF7Q8N684 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPSF7Q8N684 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPSF7Q8N684 AL138688.1-201ENST00000624851 1594 ntBASIC17.57■□□□□ 0.4
CPSF7Q8N684 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPSF7Q8N684 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPSF7Q8N684 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPSF7Q8N684 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CPSF7Q8N684 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPSF7Q8N684 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CPSF7Q8N684 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CPSF7Q8N684 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPSF7Q8N684 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.56■□□□□ 0.4
CPSF7Q8N684 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPSF7Q8N684 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPSF7Q8N684 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPSF7Q8N684 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPSF7Q8N684 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPSF7Q8N684 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPSF7Q8N684 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPSF7Q8N684 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CPSF7Q8N684 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CPSF7Q8N684 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPSF7Q8N684 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CPSF7Q8N684 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPSF7Q8N684 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPSF7Q8N684 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CPSF7Q8N684 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPSF7Q8N684 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CPSF7Q8N684 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.56■□□□□ 0.4
CPSF7Q8N684 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPSF7Q8N684 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms