Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.11■□□□□ 0.49
PACS2Q86VP3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.11■□□□□ 0.49
PACS2Q86VP3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PACS2Q86VP3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.11■□□□□ 0.49
PACS2Q86VP3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PACS2Q86VP3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PACS2Q86VP3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PACS2Q86VP3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PACS2Q86VP3 TCAF2P1-201ENST00000291129 2421 ntBASIC18.11■□□□□ 0.49
PACS2Q86VP3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PACS2Q86VP3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PACS2Q86VP3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
PACS2Q86VP3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PACS2Q86VP3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PACS2Q86VP3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.1■□□□□ 0.49
PACS2Q86VP3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PACS2Q86VP3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PACS2Q86VP3 KRASP1-201ENST00000407852 552 ntBASIC18.1■□□□□ 0.49
PACS2Q86VP3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.1■□□□□ 0.49
PACS2Q86VP3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PACS2Q86VP3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.1■□□□□ 0.49
PACS2Q86VP3 AC133681.1-201ENST00000465482 601 ntBASIC18.1■□□□□ 0.49
PACS2Q86VP3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
PACS2Q86VP3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PACS2Q86VP3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.1■□□□□ 0.49
PACS2Q86VP3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.1■□□□□ 0.49
PACS2Q86VP3 AC124016.1-201ENST00000609552 612 ntBASIC18.1■□□□□ 0.49
PACS2Q86VP3 AC110285.5-201ENST00000611501 352 ntBASIC18.1■□□□□ 0.49
PACS2Q86VP3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PACS2Q86VP3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PACS2Q86VP3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.1■□□□□ 0.49
PACS2Q86VP3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PACS2Q86VP3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PACS2Q86VP3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PACS2Q86VP3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PACS2Q86VP3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.1■□□□□ 0.49
PACS2Q86VP3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PACS2Q86VP3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
PACS2Q86VP3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.09■□□□□ 0.49
PACS2Q86VP3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS2Q86VP3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.09■□□□□ 0.49
PACS2Q86VP3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS2Q86VP3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS2Q86VP3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PACS2Q86VP3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.09■□□□□ 0.49
PACS2Q86VP3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS2Q86VP3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.09■□□□□ 0.49
PACS2Q86VP3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS2Q86VP3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS2Q86VP3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.09■□□□□ 0.49
PACS2Q86VP3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS2Q86VP3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.09■□□□□ 0.49
PACS2Q86VP3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.09■□□□□ 0.49
PACS2Q86VP3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
PACS2Q86VP3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.09■□□□□ 0.49
PACS2Q86VP3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
PACS2Q86VP3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.09■□□□□ 0.49
PACS2Q86VP3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.09■□□□□ 0.49
PACS2Q86VP3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PACS2Q86VP3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.09■□□□□ 0.49
PACS2Q86VP3 AC066615.1-201ENST00000640911 628 ntBASIC18.09■□□□□ 0.49
PACS2Q86VP3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PACS2Q86VP3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.09■□□□□ 0.49
PACS2Q86VP3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS2Q86VP3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS2Q86VP3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS2Q86VP3 AC105917.1-201ENST00000506637 2539 ntBASIC18.09■□□□□ 0.49
PACS2Q86VP3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS2Q86VP3 PHGDH-210ENST00000641115 1638 ntBASIC18.09■□□□□ 0.49
PACS2Q86VP3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS2Q86VP3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PACS2Q86VP3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
PACS2Q86VP3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
PACS2Q86VP3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PACS2Q86VP3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
PACS2Q86VP3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PACS2Q86VP3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PACS2Q86VP3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PACS2Q86VP3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PACS2Q86VP3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.08■□□□□ 0.49
PACS2Q86VP3 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.08■□□□□ 0.49
PACS2Q86VP3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.08■□□□□ 0.48
PACS2Q86VP3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PACS2Q86VP3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PACS2Q86VP3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PACS2Q86VP3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.08■□□□□ 0.48
PACS2Q86VP3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.08■□□□□ 0.48
PACS2Q86VP3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.08■□□□□ 0.48
PACS2Q86VP3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PACS2Q86VP3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PACS2Q86VP3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PACS2Q86VP3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PACS2Q86VP3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PACS2Q86VP3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PACS2Q86VP3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PACS2Q86VP3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PACS2Q86VP3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PACS2Q86VP3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.08■□□□□ 0.48
PACS2Q86VP3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.08■□□□□ 0.48
PACS2Q86VP3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms