Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 AC133552.2-202ENST00000575694 574 ntBASIC14.96□□□□□ -0.01
ZNF546Q86UE3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.96□□□□□ -0.01
ZNF546Q86UE3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ZNF546Q86UE3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ZNF546Q86UE3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.96□□□□□ -0.02
ZNF546Q86UE3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.96□□□□□ -0.02
ZNF546Q86UE3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
ZNF546Q86UE3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF546Q86UE3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 AC133963.1-201ENST00000504166 1679 ntBASIC14.94□□□□□ -0.02
ZNF546Q86UE3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 RPS2P52-201ENST00000469610 820 ntBASIC14.94□□□□□ -0.02
ZNF546Q86UE3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.94□□□□□ -0.02
ZNF546Q86UE3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms