Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LDB1Q86U70 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LDB1Q86U70 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.96■□□□□ 0.47
LDB1Q86U70 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LDB1Q86U70 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
LDB1Q86U70 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LDB1Q86U70 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LDB1Q86U70 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LDB1Q86U70 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.95■□□□□ 0.46
LDB1Q86U70 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LDB1Q86U70 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.95■□□□□ 0.46
LDB1Q86U70 GNAS-203ENST00000306120 1878 ntBASIC17.95■□□□□ 0.46
LDB1Q86U70 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LDB1Q86U70 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LDB1Q86U70 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.95■□□□□ 0.46
LDB1Q86U70 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
LDB1Q86U70 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LDB1Q86U70 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LDB1Q86U70 LINC00896-202ENST00000609602 2128 ntBASIC17.95■□□□□ 0.46
LDB1Q86U70 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LDB1Q86U70 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
LDB1Q86U70 KRT18P55-202ENST00000578578 1546 ntBASIC17.95■□□□□ 0.46
LDB1Q86U70 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LDB1Q86U70 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LDB1Q86U70 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LDB1Q86U70 HBZP1-201ENST00000354915 429 ntBASIC17.95■□□□□ 0.46
LDB1Q86U70 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.95■□□□□ 0.46
LDB1Q86U70 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.95■□□□□ 0.46
LDB1Q86U70 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.95■□□□□ 0.46
LDB1Q86U70 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LDB1Q86U70 SLC25A6P5-201ENST00000435663 894 ntBASIC17.95■□□□□ 0.46
LDB1Q86U70 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.95■□□□□ 0.46
LDB1Q86U70 HOMER2P1-201ENST00000455653 964 ntBASIC17.95■□□□□ 0.46
LDB1Q86U70 DUX4L26-201ENST00000489078 1255 ntBASIC17.95■□□□□ 0.46
LDB1Q86U70 AC063952.2-201ENST00000498792 1227 ntBASIC17.95■□□□□ 0.46
LDB1Q86U70 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.95■□□□□ 0.46
LDB1Q86U70 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.95■□□□□ 0.46
LDB1Q86U70 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.95■□□□□ 0.46
LDB1Q86U70 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.95■□□□□ 0.46
LDB1Q86U70 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.95■□□□□ 0.46
LDB1Q86U70 AC004263.2-201ENST00000617183 678 ntBASIC17.95■□□□□ 0.46
LDB1Q86U70 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.95■□□□□ 0.46
LDB1Q86U70 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LDB1Q86U70 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LDB1Q86U70 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LDB1Q86U70 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.95■□□□□ 0.46
LDB1Q86U70 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LDB1Q86U70 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LDB1Q86U70 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LDB1Q86U70 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
LDB1Q86U70 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LDB1Q86U70 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.95■□□□□ 0.46
LDB1Q86U70 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LDB1Q86U70 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.95■□□□□ 0.46
LDB1Q86U70 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.94■□□□□ 0.46
LDB1Q86U70 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LDB1Q86U70 KRT18P48-201ENST00000434763 852 ntBASIC17.94■□□□□ 0.46
LDB1Q86U70 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.94■□□□□ 0.46
LDB1Q86U70 DUTP2-201ENST00000519164 463 ntBASIC17.94■□□□□ 0.46
LDB1Q86U70 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.94■□□□□ 0.46
LDB1Q86U70 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.94■□□□□ 0.46
LDB1Q86U70 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 AC006116.8-202ENST00000587620 1550 ntBASIC17.94■□□□□ 0.46
LDB1Q86U70 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LDB1Q86U70 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.94■□□□□ 0.46
LDB1Q86U70 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.94■□□□□ 0.46
LDB1Q86U70 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.94■□□□□ 0.46
LDB1Q86U70 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB1Q86U70 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
LDB1Q86U70 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB1Q86U70 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB1Q86U70 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LDB1Q86U70 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB1Q86U70 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB1Q86U70 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB1Q86U70 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB1Q86U70 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB1Q86U70 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms