Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 PHGDH-209ENST00000641074 1780 ntBASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 MIR1238-201ENST00000408483 83 ntBASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 GRAMD4P1-201ENST00000435181 1110 ntBASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 GXYLT1P6-201ENST00000456472 1187 ntBASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 AC128688.1-201ENST00000487626 519 ntBASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 AC112497.1-201ENST00000624824 639 ntBASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 AC099343.3-201ENST00000605834 2503 ntBASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 AC092338.2-201ENST00000568827 1415 ntBASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC11.59□□□□□ -0.55
MRPL55Q7Z7F7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC11.58□□□□□ -0.55
MRPL55Q7Z7F7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
MRPL55Q7Z7F7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC11.58□□□□□ -0.55
MRPL55Q7Z7F7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
MRPL55Q7Z7F7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 AL390955.1-201ENST00000428694 934 ntBASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 MNT-208ENST00000575394 606 ntTSL 4 BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 MIR3180-4-201ENST00000582223 153 ntBASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 AC010653.2-201ENST00000623505 997 ntBASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 TMEM191A-211ENST00000637163 1067 ntBASIC11.58□□□□□ -0.56
MRPL55Q7Z7F7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms