Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 AC009154.2-201ENST00000621177 724 ntBASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD3Q7Z3D4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 FLJ13224-201ENST00000313737 1514 ntBASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 AC069148.1-201ENST00000608741 768 ntBASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.04■□□□□ 0.48
LYSMD3Q7Z3D4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 CHCHD2P8-201ENST00000429873 447 ntBASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 TSSC2-201ENST00000450217 709 ntBASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 DUTP2-201ENST00000519164 463 ntBASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 AL592071.1-201ENST00000611956 408 ntBASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms