Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP1BQ7LBR1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CHMP1BQ7LBR1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP1BQ7LBR1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.6■□□□□ 0.25
CHMP1BQ7LBR1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP1BQ7LBR1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.6■□□□□ 0.25
CHMP1BQ7LBR1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP1BQ7LBR1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.6■□□□□ 0.25
CHMP1BQ7LBR1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.6■□□□□ 0.25
CHMP1BQ7LBR1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP1BQ7LBR1 IER3-202ENST00000376377 1350 ntBASIC16.6■□□□□ 0.25
CHMP1BQ7LBR1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP1BQ7LBR1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CHMP1BQ7LBR1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP1BQ7LBR1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP1BQ7LBR1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP1BQ7LBR1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.6■□□□□ 0.25
CHMP1BQ7LBR1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CHMP1BQ7LBR1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CHMP1BQ7LBR1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP1BQ7LBR1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 AL136038.3-201ENST00000561909 1096 ntBASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP1BQ7LBR1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CHMP1BQ7LBR1 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP1BQ7LBR1 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP1BQ7LBR1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP1BQ7LBR1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 HBZP1-201ENST00000354915 429 ntBASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 UPK3BP1-201ENST00000428678 509 ntBASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 FAM86EP-206ENST00000510506 987 ntBASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 AL136038.4-201ENST00000603606 1261 ntBASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 AC135050.7-201ENST00000624508 2218 ntBASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP1BQ7LBR1 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 MTMR9LP-203ENST00000426597 1545 ntBASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms