Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.91e-9■□□□□ 10.7
LARP4Q71RC2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.681e-9■□□□□ 10.7
LARP4Q71RC2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.581e-9■□□□□ 10.7
LARP4Q71RC2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.16■□□□□ 0.51e-9■□□□□ 10.7
LARP4Q71RC2 FUS-213ENST00000570090 544 ntTSL 215.86■□□□□ 0.131e-8■□□□□ 10.7
LARP4Q71RC2 ENTPD6-204ENST00000376666 2100 ntTSL 515.35■□□□□ 0.051e-9■□□□□ 10.7
LARP4Q71RC2 ENTPD6-218ENST00000490187 1918 ntTSL 215.13■□□□□ 0.011e-9■□□□□ 10.7
LARP4Q71RC2 ENTPD6-217ENST00000485936 2588 ntTSL 215.09■□□□□ 0.011e-9■□□□□ 10.7
LARP4Q71RC2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.175e-7■□□□□ 10.7
LARP4Q71RC2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.39■■□□□ 1.175e-7■□□□□ 10.7
LARP4Q71RC2 NUCB1-204ENST00000424608 884 ntAPPRIS ALT2 TSL 518.46■□□□□ 0.555e-7■□□□□ 10.7
LARP4Q71RC2 NUCB1-207ENST00000452087 864 ntTSL 317.26■□□□□ 0.355e-7■□□□□ 10.7
LARP4Q71RC2 SHISA5-214ENST00000486344 713 ntTSL 216.89■□□□□ 0.295e-7■□□□□ 10.7
LARP4Q71RC2 MAPK3-206ENST00000461737 612 ntTSL 215.49■□□□□ 0.075e-7■□□□□ 10.7
LARP4Q71RC2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.38■□□□□ 0.055e-7■□□□□ 10.7
LARP4Q71RC2 SHISA5-205ENST00000424965 884 ntTSL 515.11■□□□□ 0.015e-7■□□□□ 10.7
LARP4Q71RC2 NUCB1-209ENST00000465524 839 ntTSL 514.76□□□□□ -0.055e-7■□□□□ 10.7
LARP4Q71RC2 NUCB1-210ENST00000469291 582 ntTSL 212.76□□□□□ -0.375e-7■□□□□ 10.7
LARP4Q71RC2 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.72□□□□□ -0.375e-7■□□□□ 10.7
LARP4Q71RC2 APOL1-202ENST00000397278 2918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.775e-7■□□□□ 10.7
LARP4Q71RC2 MAPK3-209ENST00000478356 961 ntTSL 59.98□□□□□ -0.815e-7■□□□□ 10.7
LARP4Q71RC2 NUCB1-208ENST00000460125 528 ntTSL 29.64□□□□□ -0.875e-7■□□□□ 10.7
LARP4Q71RC2 APOL1-205ENST00000422706 2901 ntAPPRIS ALT2 TSL 3 BASIC9.56□□□□□ -0.885e-7■□□□□ 10.7
LARP4Q71RC2 APOL1-206ENST00000426053 2808 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.995e-7■□□□□ 10.7
LARP4Q71RC2 MAPK3-208ENST00000473431 368 ntTSL 27.91□□□□□ -1.145e-7■□□□□ 10.7
LARP4Q71RC2 APOL1-201ENST00000319136 3000 ntAPPRIS P4 TSL 1 (best) BASIC7.83□□□□□ -1.165e-7■□□□□ 10.7
LARP4Q71RC2 FUS-211ENST00000568901 521 ntTSL 29.37□□□□□ -0.911e-8■□□□□ 10.7
LARP4Q71RC2 FUS-208ENST00000564766 791 ntTSL 25.04□□□□□ -1.61e-8■□□□□ 10.7
LARP4Q71RC2 RPL24-204ENST00000470961 572 ntTSL 29.5□□□□□ -0.892e-12■□□□□ 10.7
LARP4Q71RC2 RPS15A-211ENST00000575669 3828 nt7.37□□□□□ -1.234e-9■□□□□ 10.7
LARP4Q71RC2 RPS15A-204ENST00000563579 284 ntTSL 33.75□□□□□ -1.814e-9■□□□□ 10.7
LARP4Q71RC2 RPS25-204ENST00000527853 1462 ntTSL 216.52■□□□□ 0.232e-22■□□□□ 10.7
LARP4Q71RC2 RPS25-201ENST00000524864 1078 ntTSL 212.54□□□□□ -0.42e-22■□□□□ 10.7
LARP4Q71RC2 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.482e-22■□□□□ 10.7
LARP4Q71RC2 RPS25-203ENST00000527791 711 ntTSL 211.79□□□□□ -0.522e-22■□□□□ 10.7
LARP4Q71RC2 RPS25-206ENST00000532567 508 ntTSL 25□□□□□ -1.612e-22■□□□□ 10.7
LARP4Q71RC2 ENO1-202ENST00000464920 2266 ntTSL 1 (best)12.84□□□□□ -0.354e-33■□□□□ 10.7
LARP4Q71RC2 ENO1-201ENST00000234590 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.394e-33■□□□□ 10.7
LARP4Q71RC2 NME1-205ENST00000465188 521 ntTSL 29.5□□□□□ -0.892e-10■□□□□ 10.7
LARP4Q71RC2 NME1-204ENST00000456492 510 ntTSL 24.37□□□□□ -1.712e-10■□□□□ 10.7
LARP4Q71RC2 PDXK-204ENST00000398078 1069 ntTSL 215.31■□□□□ 0.042e-9■□□□□ 10.7
LARP4Q71RC2 PDXK-208ENST00000461123 637 ntTSL 314.69□□□□□ -0.062e-9■□□□□ 10.7
LARP4Q71RC2 PDXK-211ENST00000468392 1094 ntTSL 213.78□□□□□ -0.22e-9■□□□□ 10.7
LARP4Q71RC2 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.98□□□□□ -0.332e-9■□□□□ 10.7
LARP4Q71RC2 PDXK-203ENST00000343528 1101 ntTSL 1 (best)12.9□□□□□ -0.342e-9■□□□□ 10.7
LARP4Q71RC2 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.572e-9■□□□□ 10.7
LARP4Q71RC2 PDXK-209ENST00000467908 7194 ntTSL 3 BASIC10.49□□□□□ -0.732e-9■□□□□ 10.7
LARP4Q71RC2 ABHD17A-205ENST00000591351 4647 ntTSL 217.17■□□□□ 0.341e-7■□□□□ 10.7
LARP4Q71RC2 RNASET2-212ENST00000510083 2280 ntTSL 215.79■□□□□ 0.123e-10■□□□□ 10.7
LARP4Q71RC2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.142e-27■□□□□ 10.7
LARP4Q71RC2 AHCY-204ENST00000480653 2211 ntTSL 215.43■□□□□ 0.062e-27■□□□□ 10.7
LARP4Q71RC2 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.99□□□□□ -0.172e-27■□□□□ 10.7
LARP4Q71RC2 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.11□□□□□ -1.432e-27■□□□□ 10.7
LARP4Q71RC2 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.231e-9■□□□□ 10.7
LARP4Q71RC2 ST6GAL1-215ENST00000457772 3947 ntTSL 5 BASIC12.27□□□□□ -0.451e-9■□□□□ 10.7
LARP4Q71RC2 ST6GAL1-220ENST00000470633 4893 ntTSL 26.88□□□□□ -1.318e-8■□□□□ 10.7
LARP4Q71RC2 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.361e-9■□□□□ 10.7
LARP4Q71RC2 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.89□□□□□ -0.037e-6■□□□□ 10.7
LARP4Q71RC2 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.17e-6■□□□□ 10.7
LARP4Q71RC2 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.317e-6■□□□□ 10.7
LARP4Q71RC2 NARF-220ENST00000582907 1454 ntTSL 512.92□□□□□ -0.347e-6■□□□□ 10.7
LARP4Q71RC2 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC12.35□□□□□ -0.437e-6■□□□□ 10.7
LARP4Q71RC2 NARF-226ENST00000584513 500 ntTSL 38.45□□□□□ -1.067e-6■□□□□ 10.7
LARP4Q71RC2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.884e-8■□□□□ 10.7
LARP4Q71RC2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.49■■□□□ 1.192e-11■□□□□ 10.7
LARP4Q71RC2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.22■■□□□ 1.152e-11■□□□□ 10.7
LARP4Q71RC2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.12e-11■□□□□ 10.7
LARP4Q71RC2 PON2-204ENST00000455123 1515 ntTSL 1 (best)21.46■■□□□ 1.032e-11■□□□□ 10.7
LARP4Q71RC2 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.242e-11■□□□□ 10.7
LARP4Q71RC2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.233e-6■□□□□ 10.7
LARP4Q71RC2 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.28■□□□□ 0.043e-6■□□□□ 10.7
LARP4Q71RC2 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.243e-6■□□□□ 10.7
LARP4Q71RC2 KLC4-219ENST00000486439 756 ntTSL 213.34□□□□□ -0.273e-6■□□□□ 10.7
LARP4Q71RC2 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC12.68□□□□□ -0.383e-6■□□□□ 10.7
LARP4Q71RC2 KLC4-215ENST00000479388 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.543e-6■□□□□ 10.7
LARP4Q71RC2 KLC4-209ENST00000467906 3604 ntTSL 29.56□□□□□ -0.883e-6■□□□□ 10.7
LARP4Q71RC2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.15■□□□□ 0.184e-10■□□□□ 10.7
LARP4Q71RC2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.44□□□□□ -0.14e-10■□□□□ 10.7
LARP4Q71RC2 LSM5-201ENST00000223084 1295 ntTSL 211.66□□□□□ -0.544e-10■□□□□ 10.7
LARP4Q71RC2 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.044e-10■□□□□ 10.7
LARP4Q71RC2 LSM5-210ENST00000480956 1736 ntTSL 37.95□□□□□ -1.144e-10■□□□□ 10.7
LARP4Q71RC2 LSM5-202ENST00000409292 538 ntTSL 2 BASIC6.99□□□□□ -1.294e-10■□□□□ 10.7
LARP4Q71RC2 LSM5-209ENST00000468872 636 ntTSL 26.83□□□□□ -1.324e-10■□□□□ 10.7
LARP4Q71RC2 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.72□□□□□ -1.334e-10■□□□□ 10.7
LARP4Q71RC2 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.54□□□□□ -1.364e-10■□□□□ 10.7
LARP4Q71RC2 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.3□□□□□ -1.564e-10■□□□□ 10.7
LARP4Q71RC2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.17■□□□□ 0.984e-6■□□□□ 10.7
LARP4Q71RC2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.19■□□□□ 0.664e-6■□□□□ 10.7
LARP4Q71RC2 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.394e-6■□□□□ 10.7
LARP4Q71RC2 AOC3-206ENST00000613571 3900 ntTSL 1 (best) BASIC12.4□□□□□ -0.424e-6■□□□□ 10.7
LARP4Q71RC2 MDK-207ENST00000441869 540 ntTSL 320.1■□□□□ 0.813e-19■□□□□ 10.7
LARP4Q71RC2 MRPL43-214ENST00000523148 844 ntTSL 321.67■■□□□ 1.062e-6■□□□□ 10.7
LARP4Q71RC2 MRPL43-213ENST00000493646 897 ntTSL 1 (best)16.15■□□□□ 0.182e-6■□□□□ 10.7
LARP4Q71RC2 MRPL43-210ENST00000476012 539 ntTSL 1 (best)13.89□□□□□ -0.192e-6■□□□□ 10.7
LARP4Q71RC2 TSPAN6-201ENST00000373020 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.394e-6■□□□□ 10.7
LARP4Q71RC2 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.14□□□□□ -1.594e-6■□□□□ 10.7
LARP4Q71RC2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.723e-6■□□□□ 10.7
LARP4Q71RC2 RPL8-213ENST00000533397 730 ntTSL 215.02■□□□□ -03e-16■□□□□ 10.7
LARP4Q71RC2 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.091e-8■□□□□ 10.6
LARP4Q71RC2 RAN-201ENST00000392367 780 ntTSL 5 BASIC7.19□□□□□ -1.265e-22■□□□□ 10.6
Retrieved 100 of 15,922 protein–RNA pairs in 179.9 ms