Protein–RNA interactions for Protein: Q6ZMP0

THSD4, Thrombospondin type-1 domain-containing protein 4, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4Q6ZMP0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
THSD4Q6ZMP0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
THSD4Q6ZMP0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
THSD4Q6ZMP0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THSD4Q6ZMP0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
THSD4Q6ZMP0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.28■□□□□ 0.2
THSD4Q6ZMP0 AC080080.1-201ENST00000625121 2420 ntBASIC16.28■□□□□ 0.2
THSD4Q6ZMP0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THSD4Q6ZMP0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THSD4Q6ZMP0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
THSD4Q6ZMP0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.28■□□□□ 0.2
THSD4Q6ZMP0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THSD4Q6ZMP0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
THSD4Q6ZMP0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
THSD4Q6ZMP0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
THSD4Q6ZMP0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.28■□□□□ 0.2
THSD4Q6ZMP0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
THSD4Q6ZMP0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THSD4Q6ZMP0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.27■□□□□ 0.2
THSD4Q6ZMP0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
THSD4Q6ZMP0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
THSD4Q6ZMP0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
THSD4Q6ZMP0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THSD4Q6ZMP0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
THSD4Q6ZMP0 MMP23A-201ENST00000234610 1017 ntBASIC16.27■□□□□ 0.2
THSD4Q6ZMP0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.27■□□□□ 0.2
THSD4Q6ZMP0 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC16.27■□□□□ 0.2
THSD4Q6ZMP0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.27■□□□□ 0.2
THSD4Q6ZMP0 ECEL1P2-202ENST00000465689 757 ntBASIC16.27■□□□□ 0.2
THSD4Q6ZMP0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.27■□□□□ 0.2
THSD4Q6ZMP0 AC128688.1-201ENST00000487626 519 ntBASIC16.27■□□□□ 0.2
THSD4Q6ZMP0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
THSD4Q6ZMP0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.27■□□□□ 0.2
THSD4Q6ZMP0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.27■□□□□ 0.2
THSD4Q6ZMP0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
THSD4Q6ZMP0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.27■□□□□ 0.2
THSD4Q6ZMP0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
THSD4Q6ZMP0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
THSD4Q6ZMP0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
THSD4Q6ZMP0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
THSD4Q6ZMP0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.27■□□□□ 0.19
THSD4Q6ZMP0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
THSD4Q6ZMP0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.27■□□□□ 0.19
THSD4Q6ZMP0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
THSD4Q6ZMP0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.27■□□□□ 0.19
THSD4Q6ZMP0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
THSD4Q6ZMP0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
THSD4Q6ZMP0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
THSD4Q6ZMP0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
THSD4Q6ZMP0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 RCN1P1-201ENST00000400413 996 ntBASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 NAPSB-206ENST00000562112 1266 ntBASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 MIR3917-201ENST00000580971 93 ntBASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 LINC00167-201ENST00000530583 1419 ntBASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
THSD4Q6ZMP0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
THSD4Q6ZMP0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
THSD4Q6ZMP0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
THSD4Q6ZMP0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.25■□□□□ 0.19
THSD4Q6ZMP0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
THSD4Q6ZMP0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
THSD4Q6ZMP0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
THSD4Q6ZMP0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
THSD4Q6ZMP0 HCG11-201ENST00000411553 5696 ntBASIC16.25■□□□□ 0.19
THSD4Q6ZMP0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
THSD4Q6ZMP0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
THSD4Q6ZMP0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
THSD4Q6ZMP0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
THSD4Q6ZMP0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms