Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
C11orf88Q6PI97 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.71■□□□□ 0.1
C11orf88Q6PI97 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
C11orf88Q6PI97 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
C11orf88Q6PI97 AL645608.8-201ENST00000606034 2086 ntBASIC15.71■□□□□ 0.1
C11orf88Q6PI97 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
C11orf88Q6PI97 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 TSPY21P-201ENST00000433481 731 ntBASIC15.7■□□□□ 0.1
C11orf88Q6PI97 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.7■□□□□ 0.1
C11orf88Q6PI97 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 AC138028.4-201ENST00000564984 1845 ntBASIC15.7■□□□□ 0.1
C11orf88Q6PI97 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C11orf88Q6PI97 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 AL365209.1-201ENST00000624418 6473 ntBASIC15.69■□□□□ 0.1
C11orf88Q6PI97 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 TSPY7P-201ENST00000431358 1114 ntBASIC15.69■□□□□ 0.1
C11orf88Q6PI97 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C11orf88Q6PI97 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
C11orf88Q6PI97 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms