Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 AC106795.1-205ENST00000512851 1056 ntBASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 AF238378.1-201ENST00000526806 358 ntBASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 AC011467.2-201ENST00000598425 242 ntBASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3CQ6NXT2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
H3F3CQ6NXT2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
H3F3CQ6NXT2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.58■□□□□ 0.25
H3F3CQ6NXT2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.58■□□□□ 0.25
H3F3CQ6NXT2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
H3F3CQ6NXT2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.58■□□□□ 0.25
H3F3CQ6NXT2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
H3F3CQ6NXT2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
H3F3CQ6NXT2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.58■□□□□ 0.25
H3F3CQ6NXT2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
H3F3CQ6NXT2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H3F3CQ6NXT2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
H3F3CQ6NXT2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.58■□□□□ 0.24
H3F3CQ6NXT2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
H3F3CQ6NXT2 AC009078.2-202ENST00000463353 338 ntBASIC16.58■□□□□ 0.24
H3F3CQ6NXT2 AP002469.2-201ENST00000531724 424 ntBASIC16.58■□□□□ 0.24
H3F3CQ6NXT2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
H3F3CQ6NXT2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
H3F3CQ6NXT2 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
H3F3CQ6NXT2 AC093010.1-201ENST00000473625 1624 ntBASIC16.58■□□□□ 0.24
H3F3CQ6NXT2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
H3F3CQ6NXT2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
H3F3CQ6NXT2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
H3F3CQ6NXT2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
H3F3CQ6NXT2 INTS4P1-201ENST00000438455 1935 ntBASIC16.58■□□□□ 0.24
H3F3CQ6NXT2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.58■□□□□ 0.24
H3F3CQ6NXT2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
H3F3CQ6NXT2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H3F3CQ6NXT2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 AC097374.2-201ENST00000618617 1306 ntBASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.57■□□□□ 0.24
H3F3CQ6NXT2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms