Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CERKLQ49MI3 MIR574-201ENST00000385209 96 ntBASIC20.96■□□□□ 0.95
CERKLQ49MI3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CERKLQ49MI3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.96■□□□□ 0.95
CERKLQ49MI3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CERKLQ49MI3 NKAPP1-205ENST00000585790 367 ntBASIC20.96■□□□□ 0.95
CERKLQ49MI3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.96■□□□□ 0.95
CERKLQ49MI3 AL139288.1-201ENST00000623748 933 ntBASIC20.96■□□□□ 0.95
CERKLQ49MI3 AC116407.3-201ENST00000623905 1129 ntBASIC20.96■□□□□ 0.95
CERKLQ49MI3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CERKLQ49MI3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.96■□□□□ 0.95
CERKLQ49MI3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.96■□□□□ 0.95
CERKLQ49MI3 AC093677.2-201ENST00000600169 1863 ntBASIC20.96■□□□□ 0.95
CERKLQ49MI3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CERKLQ49MI3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.95■□□□□ 0.95
CERKLQ49MI3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
CERKLQ49MI3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CERKLQ49MI3 AC093503.3-201ENST00000624917 2352 ntBASIC20.95■□□□□ 0.94
CERKLQ49MI3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CERKLQ49MI3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.95■□□□□ 0.94
CERKLQ49MI3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CERKLQ49MI3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CERKLQ49MI3 AC122714.2-201ENST00000502787 707 ntBASIC20.95■□□□□ 0.94
CERKLQ49MI3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.95■□□□□ 0.94
CERKLQ49MI3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.95■□□□□ 0.94
CERKLQ49MI3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.95■□□□□ 0.94
CERKLQ49MI3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.95■□□□□ 0.94
CERKLQ49MI3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CERKLQ49MI3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CERKLQ49MI3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CERKLQ49MI3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CERKLQ49MI3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CERKLQ49MI3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
CERKLQ49MI3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.95■□□□□ 0.94
CERKLQ49MI3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CERKLQ49MI3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CERKLQ49MI3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CERKLQ49MI3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CERKLQ49MI3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CERKLQ49MI3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.94■□□□□ 0.94
CERKLQ49MI3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CERKLQ49MI3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CERKLQ49MI3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CERKLQ49MI3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CERKLQ49MI3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CERKLQ49MI3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CERKLQ49MI3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.94■□□□□ 0.94
CERKLQ49MI3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CERKLQ49MI3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CERKLQ49MI3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CERKLQ49MI3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CERKLQ49MI3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.94■□□□□ 0.94
CERKLQ49MI3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CERKLQ49MI3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.94■□□□□ 0.94
CERKLQ49MI3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.94■□□□□ 0.94
CERKLQ49MI3 AC025062.2-201ENST00000605477 670 ntBASIC20.94■□□□□ 0.94
CERKLQ49MI3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CERKLQ49MI3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CERKLQ49MI3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.94■□□□□ 0.94
CERKLQ49MI3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CERKLQ49MI3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CERKLQ49MI3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CERKLQ49MI3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CERKLQ49MI3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.93■□□□□ 0.94
CERKLQ49MI3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CERKLQ49MI3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
CERKLQ49MI3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CERKLQ49MI3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CERKLQ49MI3 PMS2P1-201ENST00000431037 1228 ntBASIC20.93■□□□□ 0.94
CERKLQ49MI3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CERKLQ49MI3 RPL13AP23-201ENST00000480739 586 ntBASIC20.93■□□□□ 0.94
CERKLQ49MI3 OR7E14P-202ENST00000530490 1290 ntBASIC20.93■□□□□ 0.94
CERKLQ49MI3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CERKLQ49MI3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.93■□□□□ 0.94
CERKLQ49MI3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.93■□□□□ 0.94
CERKLQ49MI3 AC023511.2-201ENST00000618803 211 ntBASIC20.93■□□□□ 0.94
CERKLQ49MI3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CERKLQ49MI3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CERKLQ49MI3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CERKLQ49MI3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.93■□□□□ 0.94
CERKLQ49MI3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CERKLQ49MI3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.93■□□□□ 0.94
CERKLQ49MI3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CERKLQ49MI3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CERKLQ49MI3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CERKLQ49MI3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CERKLQ49MI3 AC135776.1-201ENST00000319817 2481 ntBASIC20.93■□□□□ 0.94
CERKLQ49MI3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CERKLQ49MI3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CERKLQ49MI3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CERKLQ49MI3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CERKLQ49MI3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.92■□□□□ 0.94
CERKLQ49MI3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CERKLQ49MI3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CERKLQ49MI3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.92■□□□□ 0.94
CERKLQ49MI3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CERKLQ49MI3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CERKLQ49MI3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CERKLQ49MI3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.92■□□□□ 0.94
CERKLQ49MI3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms