Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-BQ31612 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-BQ31612 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.38■□□□□ 0.37
HLA-BQ31612 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.38■□□□□ 0.37
HLA-BQ31612 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-BQ31612 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-BQ31612 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-BQ31612 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-BQ31612 ESPNP-201ENST00000270691 2015 ntBASIC17.37■□□□□ 0.37
HLA-BQ31612 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-BQ31612 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-BQ31612 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-BQ31612 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-BQ31612 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.37■□□□□ 0.37
HLA-BQ31612 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.37■□□□□ 0.37
HLA-BQ31612 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-BQ31612 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.37■□□□□ 0.37
HLA-BQ31612 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HLA-BQ31612 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HLA-BQ31612 AC073592.5-201ENST00000624854 528 ntBASIC17.37■□□□□ 0.37
HLA-BQ31612 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.37■□□□□ 0.37
HLA-BQ31612 KRT18P28-201ENST00000453838 1332 ntBASIC17.37■□□□□ 0.37
HLA-BQ31612 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-BQ31612 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-BQ31612 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HLA-BQ31612 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-BQ31612 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-BQ31612 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-BQ31612 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-BQ31612 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
HLA-BQ31612 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-BQ31612 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-BQ31612 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-BQ31612 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
HLA-BQ31612 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
HLA-BQ31612 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-BQ31612 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-BQ31612 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
HLA-BQ31612 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.36■□□□□ 0.37
HLA-BQ31612 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.36■□□□□ 0.37
HLA-BQ31612 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.36■□□□□ 0.37
HLA-BQ31612 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-BQ31612 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.36■□□□□ 0.37
HLA-BQ31612 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.36■□□□□ 0.37
HLA-BQ31612 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-BQ31612 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-BQ31612 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-BQ31612 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.36■□□□□ 0.37
HLA-BQ31612 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.36■□□□□ 0.37
HLA-BQ31612 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-BQ31612 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-BQ31612 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-BQ31612 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HLA-BQ31612 AC022898.2-201ENST00000616822 1312 ntBASIC17.36■□□□□ 0.37
HLA-BQ31612 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-BQ31612 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-BQ31612 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-BQ31612 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-BQ31612 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-BQ31612 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-BQ31612 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-BQ31612 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-BQ31612 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-BQ31612 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-BQ31612 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-BQ31612 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.35■□□□□ 0.37
HLA-BQ31612 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-BQ31612 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HLA-BQ31612 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-BQ31612 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-BQ31612 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-BQ31612 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
HLA-BQ31612 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-BQ31612 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-BQ31612 CRYGEP-201ENST00000412192 528 ntBASIC17.35■□□□□ 0.37
HLA-BQ31612 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.35■□□□□ 0.37
HLA-BQ31612 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HLA-BQ31612 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-BQ31612 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
HLA-BQ31612 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.35■□□□□ 0.37
HLA-BQ31612 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HLA-BQ31612 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.35■□□□□ 0.37
HLA-BQ31612 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.35■□□□□ 0.37
HLA-BQ31612 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
HLA-BQ31612 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.35■□□□□ 0.37
HLA-BQ31612 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.35■□□□□ 0.37
HLA-BQ31612 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-BQ31612 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-BQ31612 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-BQ31612 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.35■□□□□ 0.37
HLA-BQ31612 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-BQ31612 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-BQ31612 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-BQ31612 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-BQ31612 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-BQ31612 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-BQ31612 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-BQ31612 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-BQ31612 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-BQ31612 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms