Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH17Q12864 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH17Q12864 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH17Q12864 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH17Q12864 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH17Q12864 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH17Q12864 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CDH17Q12864 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CDH17Q12864 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH17Q12864 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH17Q12864 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH17Q12864 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CDH17Q12864 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
CDH17Q12864 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH17Q12864 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
CDH17Q12864 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH17Q12864 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH17Q12864 RNF152P1-201ENST00000397754 604 ntBASIC18.17■□□□□ 0.5
CDH17Q12864 TSPY5P-201ENST00000426936 936 ntBASIC18.17■□□□□ 0.5
CDH17Q12864 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH17Q12864 KRT18P65-201ENST00000439811 1286 ntBASIC18.17■□□□□ 0.5
CDH17Q12864 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.17■□□□□ 0.5
CDH17Q12864 HOMER2P1-201ENST00000455653 964 ntBASIC18.17■□□□□ 0.5
CDH17Q12864 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH17Q12864 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.17■□□□□ 0.5
CDH17Q12864 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.17■□□□□ 0.5
CDH17Q12864 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH17Q12864 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.17■□□□□ 0.5
CDH17Q12864 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH17Q12864 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH17Q12864 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CDH17Q12864 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH17Q12864 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH17Q12864 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH17Q12864 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH17Q12864 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH17Q12864 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH17Q12864 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH17Q12864 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH17Q12864 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH17Q12864 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH17Q12864 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CDH17Q12864 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CDH17Q12864 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.16■□□□□ 0.5
CDH17Q12864 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH17Q12864 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CDH17Q12864 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.16■□□□□ 0.5
CDH17Q12864 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH17Q12864 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH17Q12864 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH17Q12864 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CDH17Q12864 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH17Q12864 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH17Q12864 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH17Q12864 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH17Q12864 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH17Q12864 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH17Q12864 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.16■□□□□ 0.5
CDH17Q12864 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH17Q12864 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.16■□□□□ 0.5
CDH17Q12864 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH17Q12864 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH17Q12864 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH17Q12864 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH17Q12864 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH17Q12864 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH17Q12864 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH17Q12864 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH17Q12864 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH17Q12864 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH17Q12864 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH17Q12864 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH17Q12864 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CDH17Q12864 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH17Q12864 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH17Q12864 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CDH17Q12864 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CDH17Q12864 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CDH17Q12864 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH17Q12864 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH17Q12864 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH17Q12864 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH17Q12864 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH17Q12864 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CDH17Q12864 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH17Q12864 AK4P3-201ENST00000418260 669 ntBASIC18.15■□□□□ 0.5
CDH17Q12864 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDH17Q12864 AC092597.1-201ENST00000487352 616 ntBASIC18.15■□□□□ 0.5
CDH17Q12864 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.15■□□□□ 0.5
CDH17Q12864 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
CDH17Q12864 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.15■□□□□ 0.5
CDH17Q12864 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH17Q12864 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH17Q12864 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH17Q12864 AC006011.2-201ENST00000621313 1158 ntBASIC18.15■□□□□ 0.5
CDH17Q12864 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH17Q12864 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH17Q12864 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH17Q12864 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH17Q12864 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms