Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL20P78556 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCL20P78556 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
CCL20P78556 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCL20P78556 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCL20P78556 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL20P78556 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CCL20P78556 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL20P78556 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.16□□□□□ -0.14
CCL20P78556 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
CCL20P78556 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL20P78556 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL20P78556 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL20P78556 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL20P78556 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL20P78556 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
CCL20P78556 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL20P78556 OR6D1P-203ENST00000641209 4860 ntBASIC14.16□□□□□ -0.14
CCL20P78556 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL20P78556 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CCL20P78556 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL20P78556 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL20P78556 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.16□□□□□ -0.14
CCL20P78556 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL20P78556 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CCL20P78556 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL20P78556 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.16□□□□□ -0.14
CCL20P78556 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.16□□□□□ -0.14
CCL20P78556 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.16□□□□□ -0.14
CCL20P78556 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.16□□□□□ -0.14
CCL20P78556 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL20P78556 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.16□□□□□ -0.14
CCL20P78556 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL20P78556 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL20P78556 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL20P78556 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CCL20P78556 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL20P78556 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL20P78556 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL20P78556 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL20P78556 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL20P78556 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL20P78556 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.16□□□□□ -0.14
CCL20P78556 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL20P78556 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.15□□□□□ -0.14
CCL20P78556 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL20P78556 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL20P78556 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCL20P78556 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCL20P78556 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
CCL20P78556 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 LINC00304-203ENST00000565008 1864 ntBASIC14.15□□□□□ -0.14
CCL20P78556 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL20P78556 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL20P78556 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.15□□□□□ -0.14
CCL20P78556 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CCL20P78556 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL20P78556 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL20P78556 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL20P78556 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL20P78556 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCL20P78556 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CCL20P78556 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
CCL20P78556 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL20P78556 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CCL20P78556 AC006449.5-201ENST00000610658 2098 ntBASIC14.14□□□□□ -0.15
CCL20P78556 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL20P78556 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CCL20P78556 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL20P78556 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CCL20P78556 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL20P78556 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL20P78556 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms