Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.52■□□□□ 0.4
YBX1P67809 AC116407.4-201ENST00000623319 1061 ntBASIC17.52■□□□□ 0.4
YBX1P67809 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
YBX1P67809 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
YBX1P67809 LINC00602-201ENST00000629776 2065 ntBASIC17.52■□□□□ 0.39
YBX1P67809 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
YBX1P67809 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
YBX1P67809 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
YBX1P67809 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
YBX1P67809 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.52■□□□□ 0.39
YBX1P67809 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
YBX1P67809 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
YBX1P67809 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
YBX1P67809 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
YBX1P67809 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
YBX1P67809 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
YBX1P67809 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
YBX1P67809 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.51■□□□□ 0.39
YBX1P67809 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
YBX1P67809 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
YBX1P67809 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
YBX1P67809 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
YBX1P67809 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
YBX1P67809 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
YBX1P67809 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
YBX1P67809 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
YBX1P67809 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
YBX1P67809 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.51■□□□□ 0.39
YBX1P67809 KRT18P48-201ENST00000434763 852 ntBASIC17.51■□□□□ 0.39
YBX1P67809 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
YBX1P67809 AP003733.1-201ENST00000491725 852 ntBASIC17.51■□□□□ 0.39
YBX1P67809 AC005332.3-201ENST00000589904 676 ntBASIC17.51■□□□□ 0.39
YBX1P67809 AC004263.2-201ENST00000617183 678 ntBASIC17.51■□□□□ 0.39
YBX1P67809 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
YBX1P67809 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
YBX1P67809 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
YBX1P67809 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
YBX1P67809 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
YBX1P67809 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.51■□□□□ 0.39
YBX1P67809 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
YBX1P67809 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.5■□□□□ 0.39
YBX1P67809 Z83836.1-201ENST00000624605 1642 ntBASIC17.5■□□□□ 0.39
YBX1P67809 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
YBX1P67809 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.5■□□□□ 0.39
YBX1P67809 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
YBX1P67809 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
YBX1P67809 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
YBX1P67809 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.5■□□□□ 0.39
YBX1P67809 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
YBX1P67809 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
YBX1P67809 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
YBX1P67809 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.5■□□□□ 0.39
YBX1P67809 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
YBX1P67809 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
YBX1P67809 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
YBX1P67809 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.5■□□□□ 0.39
YBX1P67809 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
YBX1P67809 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
YBX1P67809 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
YBX1P67809 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
YBX1P67809 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.5■□□□□ 0.39
YBX1P67809 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.5■□□□□ 0.39
YBX1P67809 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.5■□□□□ 0.39
YBX1P67809 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
YBX1P67809 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.5■□□□□ 0.39
YBX1P67809 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.5■□□□□ 0.39
YBX1P67809 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
YBX1P67809 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.5■□□□□ 0.39
YBX1P67809 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.5■□□□□ 0.39
YBX1P67809 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
YBX1P67809 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
YBX1P67809 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
YBX1P67809 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
YBX1P67809 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.5■□□□□ 0.39
YBX1P67809 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
YBX1P67809 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.5■□□□□ 0.39
YBX1P67809 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
YBX1P67809 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
YBX1P67809 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
YBX1P67809 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
YBX1P67809 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
YBX1P67809 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
YBX1P67809 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.49■□□□□ 0.39
YBX1P67809 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.49■□□□□ 0.39
YBX1P67809 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.49■□□□□ 0.39
YBX1P67809 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
YBX1P67809 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
YBX1P67809 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
YBX1P67809 LINC00167-201ENST00000530583 1419 ntBASIC17.49■□□□□ 0.39
YBX1P67809 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
YBX1P67809 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
YBX1P67809 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.49■□□□□ 0.39
YBX1P67809 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
YBX1P67809 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
YBX1P67809 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
YBX1P67809 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
YBX1P67809 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
YBX1P67809 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.49■□□□□ 0.39
YBX1P67809 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.49■□□□□ 0.39
YBX1P67809 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms