Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SKP1P63208 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SKP1P63208 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SKP1P63208 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.06■□□□□ 0.32
SKP1P63208 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SKP1P63208 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.06■□□□□ 0.32
SKP1P63208 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.06■□□□□ 0.32
SKP1P63208 DRAXINP1-201ENST00000437611 948 ntBASIC17.06■□□□□ 0.32
SKP1P63208 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.06■□□□□ 0.32
SKP1P63208 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.06■□□□□ 0.32
SKP1P63208 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SKP1P63208 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SKP1P63208 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.06■□□□□ 0.32
SKP1P63208 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SKP1P63208 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SKP1P63208 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.06■□□□□ 0.32
SKP1P63208 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SKP1P63208 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SKP1P63208 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SKP1P63208 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SKP1P63208 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SKP1P63208 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.06■□□□□ 0.32
SKP1P63208 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SKP1P63208 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.06■□□□□ 0.32
SKP1P63208 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SKP1P63208 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SKP1P63208 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SKP1P63208 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SKP1P63208 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SKP1P63208 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SKP1P63208 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SKP1P63208 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.05■□□□□ 0.32
SKP1P63208 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.05■□□□□ 0.32
SKP1P63208 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SKP1P63208 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SKP1P63208 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SKP1P63208 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SKP1P63208 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.05■□□□□ 0.32
SKP1P63208 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SKP1P63208 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SKP1P63208 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.05■□□□□ 0.32
SKP1P63208 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SKP1P63208 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SKP1P63208 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SKP1P63208 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SKP1P63208 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SKP1P63208 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.05■□□□□ 0.32
SKP1P63208 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.05■□□□□ 0.32
SKP1P63208 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.05■□□□□ 0.32
SKP1P63208 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.05■□□□□ 0.32
SKP1P63208 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SKP1P63208 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SKP1P63208 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SKP1P63208 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SKP1P63208 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SKP1P63208 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SKP1P63208 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.05■□□□□ 0.32
SKP1P63208 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SKP1P63208 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SKP1P63208 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SKP1P63208 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SKP1P63208 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SKP1P63208 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SKP1P63208 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SKP1P63208 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SKP1P63208 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SKP1P63208 BICD1-207ENST00000551848 1962 ntBASIC17.04■□□□□ 0.32
SKP1P63208 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SKP1P63208 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.04■□□□□ 0.32
SKP1P63208 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SKP1P63208 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SKP1P63208 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SKP1P63208 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SKP1P63208 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SKP1P63208 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.04■□□□□ 0.32
SKP1P63208 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.04■□□□□ 0.32
SKP1P63208 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SKP1P63208 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
SKP1P63208 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SKP1P63208 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SKP1P63208 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.04■□□□□ 0.32
SKP1P63208 RN7SL606P-201ENST00000472779 293 ntBASIC17.04■□□□□ 0.32
SKP1P63208 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.04■□□□□ 0.32
SKP1P63208 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.04■□□□□ 0.32
SKP1P63208 AP002414.4-201ENST00000589764 1148 ntBASIC17.04■□□□□ 0.32
SKP1P63208 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.04■□□□□ 0.32
SKP1P63208 AC092329.2-201ENST00000598402 547 ntBASIC17.04■□□□□ 0.32
SKP1P63208 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.04■□□□□ 0.32
SKP1P63208 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SKP1P63208 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SKP1P63208 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.04■□□□□ 0.32
SKP1P63208 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SKP1P63208 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SKP1P63208 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SKP1P63208 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SKP1P63208 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SKP1P63208 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SKP1P63208 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SKP1P63208 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SKP1P63208 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms