Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.65■□□□□ 0.26
PER3P56645 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.65■□□□□ 0.26
PER3P56645 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.65■□□□□ 0.26
PER3P56645 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.65■□□□□ 0.26
PER3P56645 SLC25A6P4-201ENST00000586535 553 ntBASIC16.65■□□□□ 0.26
PER3P56645 Z69720.1-201ENST00000601483 472 ntBASIC16.65■□□□□ 0.26
PER3P56645 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.65■□□□□ 0.26
PER3P56645 AL157888.1-201ENST00000631930 593 ntBASIC16.65■□□□□ 0.26
PER3P56645 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PER3P56645 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PER3P56645 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PER3P56645 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PER3P56645 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PER3P56645 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PER3P56645 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.65■□□□□ 0.26
PER3P56645 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PER3P56645 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
PER3P56645 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PER3P56645 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PER3P56645 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PER3P56645 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PER3P56645 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.65■□□□□ 0.26
PER3P56645 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PER3P56645 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.64■□□□□ 0.25
PER3P56645 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PER3P56645 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PER3P56645 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.64■□□□□ 0.25
PER3P56645 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.64■□□□□ 0.25
PER3P56645 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PER3P56645 IRX1P1-201ENST00000438849 1838 ntBASIC16.64■□□□□ 0.25
PER3P56645 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.64■□□□□ 0.25
PER3P56645 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
PER3P56645 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PER3P56645 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PER3P56645 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PER3P56645 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.64■□□□□ 0.25
PER3P56645 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.64■□□□□ 0.25
PER3P56645 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PER3P56645 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PER3P56645 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PER3P56645 KRT18P13-201ENST00000400056 1290 ntBASIC16.64■□□□□ 0.25
PER3P56645 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.64■□□□□ 0.25
PER3P56645 VENTXP7-201ENST00000475503 772 ntBASIC16.64■□□□□ 0.25
PER3P56645 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.64■□□□□ 0.25
PER3P56645 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PER3P56645 AC074051.2-201ENST00000565115 352 ntBASIC16.64■□□□□ 0.25
PER3P56645 AC138894.3-201ENST00000603787 634 ntBASIC16.64■□□□□ 0.25
PER3P56645 BX640515.1-201ENST00000617215 977 ntBASIC16.64■□□□□ 0.25
PER3P56645 AL109659.2-201ENST00000606809 1674 ntBASIC16.64■□□□□ 0.25
PER3P56645 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
PER3P56645 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PER3P56645 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.64■□□□□ 0.25
PER3P56645 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.64■□□□□ 0.25
PER3P56645 AC009053.2-201ENST00000563701 2365 ntBASIC16.64■□□□□ 0.25
PER3P56645 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PER3P56645 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.64■□□□□ 0.25
PER3P56645 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PER3P56645 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PER3P56645 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PER3P56645 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.63■□□□□ 0.25
PER3P56645 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PER3P56645 OR6D1P-202ENST00000641007 5290 ntBASIC16.63■□□□□ 0.25
PER3P56645 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.63■□□□□ 0.25
PER3P56645 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
PER3P56645 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PER3P56645 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.63■□□□□ 0.25
PER3P56645 AC090164.3-201ENST00000610780 2143 ntBASIC16.63■□□□□ 0.25
PER3P56645 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
PER3P56645 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PER3P56645 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PER3P56645 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.63■□□□□ 0.25
PER3P56645 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PER3P56645 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PER3P56645 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.63■□□□□ 0.25
PER3P56645 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PER3P56645 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.63■□□□□ 0.25
PER3P56645 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.63■□□□□ 0.25
PER3P56645 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.63■□□□□ 0.25
PER3P56645 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PER3P56645 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.63■□□□□ 0.25
PER3P56645 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.63■□□□□ 0.25
PER3P56645 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.63■□□□□ 0.25
PER3P56645 IGHV3-41-201ENST00000613121 348 ntBASIC16.63■□□□□ 0.25
PER3P56645 AC079602.3-201ENST00000623931 403 ntBASIC16.63■□□□□ 0.25
PER3P56645 BICD1-207ENST00000551848 1962 ntBASIC16.63■□□□□ 0.25
PER3P56645 FP475955.4-201ENST00000623131 1990 ntBASIC16.63■□□□□ 0.25
PER3P56645 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PER3P56645 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PER3P56645 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PER3P56645 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
PER3P56645 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PER3P56645 AC141586.3-201ENST00000562166 1838 ntBASIC16.63■□□□□ 0.25
PER3P56645 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
PER3P56645 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PER3P56645 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PER3P56645 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PER3P56645 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PER3P56645 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PER3P56645 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PER3P56645 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms