Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CDH8P55286 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH8P55286 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH8P55286 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.17■□□□□ 0.66
CDH8P55286 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH8P55286 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH8P55286 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH8P55286 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.17■□□□□ 0.66
CDH8P55286 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CDH8P55286 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.17■□□□□ 0.66
CDH8P55286 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH8P55286 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH8P55286 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.17■□□□□ 0.66
CDH8P55286 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.17■□□□□ 0.66
CDH8P55286 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH8P55286 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.17■□□□□ 0.66
CDH8P55286 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH8P55286 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH8P55286 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH8P55286 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH8P55286 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH8P55286 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.16■□□□□ 0.66
CDH8P55286 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH8P55286 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CDH8P55286 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH8P55286 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH8P55286 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.16■□□□□ 0.66
CDH8P55286 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH8P55286 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CDH8P55286 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH8P55286 AC005336.2-201ENST00000593183 939 ntBASIC19.16■□□□□ 0.66
CDH8P55286 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.16■□□□□ 0.66
CDH8P55286 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.16■□□□□ 0.66
CDH8P55286 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.16■□□□□ 0.66
CDH8P55286 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
CDH8P55286 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
CDH8P55286 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
CDH8P55286 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CDH8P55286 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 NOC2LP1-202ENST00000452600 2235 ntBASIC19.16■□□□□ 0.66
CDH8P55286 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH8P55286 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH8P55286 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH8P55286 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
CDH8P55286 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH8P55286 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CDH8P55286 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CDH8P55286 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH8P55286 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH8P55286 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH8P55286 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
CDH8P55286 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CDH8P55286 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH8P55286 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH8P55286 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CDH8P55286 KRT18P56-201ENST00000507275 550 ntBASIC19.15■□□□□ 0.66
CDH8P55286 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH8P55286 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.15■□□□□ 0.66
CDH8P55286 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CDH8P55286 AC074051.2-201ENST00000565115 352 ntBASIC19.15■□□□□ 0.66
CDH8P55286 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.15■□□□□ 0.66
CDH8P55286 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH8P55286 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH8P55286 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH8P55286 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.15■□□□□ 0.66
CDH8P55286 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH8P55286 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH8P55286 AC022898.2-201ENST00000616822 1312 ntBASIC19.15■□□□□ 0.66
CDH8P55286 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CDH8P55286 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH8P55286 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH8P55286 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH8P55286 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH8P55286 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH8P55286 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH8P55286 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDH8P55286 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms