Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CLCN3P51790 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.7■□□□□ 0.74
CLCN3P51790 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN3P51790 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.7■□□□□ 0.74
CLCN3P51790 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN3P51790 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.7■□□□□ 0.74
CLCN3P51790 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.7■□□□□ 0.74
CLCN3P51790 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN3P51790 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN3P51790 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.7■□□□□ 0.74
CLCN3P51790 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
CLCN3P51790 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.7■□□□□ 0.74
CLCN3P51790 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN3P51790 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN3P51790 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN3P51790 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.69■□□□□ 0.74
CLCN3P51790 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCN3P51790 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.69■□□□□ 0.74
CLCN3P51790 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.69■□□□□ 0.74
CLCN3P51790 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.69■□□□□ 0.74
CLCN3P51790 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN3P51790 FAM220CP-201ENST00000395253 831 ntBASIC19.69■□□□□ 0.74
CLCN3P51790 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN3P51790 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCN3P51790 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCN3P51790 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.69■□□□□ 0.74
CLCN3P51790 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
CLCN3P51790 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN3P51790 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN3P51790 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN3P51790 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN3P51790 AC097374.2-201ENST00000618617 1306 ntBASIC19.69■□□□□ 0.74
CLCN3P51790 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN3P51790 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CLCN3P51790 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCN3P51790 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.68■□□□□ 0.74
CLCN3P51790 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN3P51790 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN3P51790 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.68■□□□□ 0.74
CLCN3P51790 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN3P51790 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.68■□□□□ 0.74
CLCN3P51790 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.68■□□□□ 0.74
CLCN3P51790 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN3P51790 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN3P51790 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN3P51790 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.68■□□□□ 0.74
CLCN3P51790 AC096633.1-201ENST00000422446 749 ntBASIC19.68■□□□□ 0.74
CLCN3P51790 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.68■□□□□ 0.74
CLCN3P51790 AC018712.1-201ENST00000455767 687 ntBASIC19.68■□□□□ 0.74
CLCN3P51790 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.68■□□□□ 0.74
CLCN3P51790 AF186996.4-201ENST00000467186 377 ntBASIC19.68■□□□□ 0.74
CLCN3P51790 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.68■□□□□ 0.74
CLCN3P51790 AP001005.1-201ENST00000571755 1248 ntBASIC19.68■□□□□ 0.74
CLCN3P51790 REXO1L9P-201ENST00000604264 2108 ntBASIC19.68■□□□□ 0.74
CLCN3P51790 AC064862.7-201ENST00000604520 867 ntBASIC19.68■□□□□ 0.74
CLCN3P51790 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.68■□□□□ 0.74
CLCN3P51790 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CLCN3P51790 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN3P51790 AC022898.2-201ENST00000616822 1312 ntBASIC19.68■□□□□ 0.74
CLCN3P51790 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN3P51790 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CLCN3P51790 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN3P51790 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN3P51790 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CLCN3P51790 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN3P51790 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CLCN3P51790 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN3P51790 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN3P51790 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.68■□□□□ 0.74
CLCN3P51790 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN3P51790 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN3P51790 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN3P51790 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN3P51790 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
CLCN3P51790 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CLCN3P51790 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN3P51790 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN3P51790 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.67■□□□□ 0.74
CLCN3P51790 AC100803.2-201ENST00000562459 1963 ntBASIC19.67■□□□□ 0.74
CLCN3P51790 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN3P51790 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.67■□□□□ 0.74
CLCN3P51790 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN3P51790 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.67■□□□□ 0.74
CLCN3P51790 AL031284.1-201ENST00000419297 478 ntBASIC19.67■□□□□ 0.74
CLCN3P51790 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN3P51790 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CLCN3P51790 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN3P51790 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CLCN3P51790 SART3-203ENST00000546611 1184 ntBASIC19.67■□□□□ 0.74
CLCN3P51790 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.67■□□□□ 0.74
CLCN3P51790 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN3P51790 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.67■□□□□ 0.74
CLCN3P51790 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN3P51790 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.67■□□□□ 0.74
CLCN3P51790 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN3P51790 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN3P51790 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN3P51790 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CLCN3P51790 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN3P51790 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms