Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6CP51160 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6CP51160 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6CP51160 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.43■□□□□ 0.7
PDE6CP51160 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.43■□□□□ 0.7
PDE6CP51160 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PDE6CP51160 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.43■□□□□ 0.7
PDE6CP51160 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
PDE6CP51160 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.43■□□□□ 0.7
PDE6CP51160 AC008687.5-201ENST00000593746 558 ntBASIC19.43■□□□□ 0.7
PDE6CP51160 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PDE6CP51160 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.43■□□□□ 0.7
PDE6CP51160 AC093458.2-201ENST00000623150 629 ntBASIC19.43■□□□□ 0.7
PDE6CP51160 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6CP51160 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PDE6CP51160 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6CP51160 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PDE6CP51160 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.43■□□□□ 0.7
PDE6CP51160 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PDE6CP51160 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6CP51160 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.43■□□□□ 0.7
PDE6CP51160 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6CP51160 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6CP51160 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6CP51160 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6CP51160 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6CP51160 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.43■□□□□ 0.7
PDE6CP51160 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6CP51160 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6CP51160 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6CP51160 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6CP51160 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PDE6CP51160 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6CP51160 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.42■□□□□ 0.7
PDE6CP51160 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6CP51160 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6CP51160 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6CP51160 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.42■□□□□ 0.7
PDE6CP51160 PVRIG2P-201ENST00000435460 978 ntBASIC19.42■□□□□ 0.7
PDE6CP51160 SLC25A6P5-201ENST00000435663 894 ntBASIC19.42■□□□□ 0.7
PDE6CP51160 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PDE6CP51160 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PDE6CP51160 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.42■□□□□ 0.7
PDE6CP51160 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.42■□□□□ 0.7
PDE6CP51160 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6CP51160 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.42■□□□□ 0.7
PDE6CP51160 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.42■□□□□ 0.7
PDE6CP51160 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6CP51160 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.42■□□□□ 0.7
PDE6CP51160 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.42■□□□□ 0.7
PDE6CP51160 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PDE6CP51160 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6CP51160 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.42■□□□□ 0.7
PDE6CP51160 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PDE6CP51160 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6CP51160 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.42■□□□□ 0.7
PDE6CP51160 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6CP51160 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6CP51160 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PDE6CP51160 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6CP51160 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6CP51160 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6CP51160 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6CP51160 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6CP51160 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6CP51160 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6CP51160 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PDE6CP51160 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PDE6CP51160 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6CP51160 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6CP51160 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6CP51160 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.41■□□□□ 0.7
PDE6CP51160 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.41■□□□□ 0.7
PDE6CP51160 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PDE6CP51160 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6CP51160 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.41■□□□□ 0.7
PDE6CP51160 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PDE6CP51160 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6CP51160 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PDE6CP51160 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6CP51160 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.41■□□□□ 0.7
PDE6CP51160 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.41■□□□□ 0.7
PDE6CP51160 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PDE6CP51160 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.41■□□□□ 0.7
PDE6CP51160 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.41■□□□□ 0.7
PDE6CP51160 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6CP51160 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6CP51160 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.41■□□□□ 0.7
PDE6CP51160 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6CP51160 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6CP51160 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6CP51160 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PDE6CP51160 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.41■□□□□ 0.7
PDE6CP51160 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6CP51160 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.41■□□□□ 0.7
PDE6CP51160 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE6CP51160 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.4■□□□□ 0.7
PDE6CP51160 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PDE6CP51160 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.4■□□□□ 0.7
PDE6CP51160 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms