Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX2P48431 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX2P48431 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX2P48431 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX2P48431 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX2P48431 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
SOX2P48431 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.85■□□□□ 0.13
SOX2P48431 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX2P48431 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX2P48431 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.84■□□□□ 0.13
SOX2P48431 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
SOX2P48431 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.84■□□□□ 0.13
SOX2P48431 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
SOX2P48431 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.84■□□□□ 0.13
SOX2P48431 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX2P48431 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX2P48431 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.84■□□□□ 0.13
SOX2P48431 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX2P48431 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX2P48431 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.84■□□□□ 0.13
SOX2P48431 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX2P48431 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX2P48431 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX2P48431 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SOX2P48431 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX2P48431 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SOX2P48431 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SOX2P48431 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.84■□□□□ 0.13
SOX2P48431 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.84■□□□□ 0.13
SOX2P48431 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.84■□□□□ 0.13
SOX2P48431 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.84■□□□□ 0.13
SOX2P48431 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.84■□□□□ 0.13
SOX2P48431 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.84■□□□□ 0.13
SOX2P48431 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SOX2P48431 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX2P48431 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX2P48431 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.84■□□□□ 0.13
SOX2P48431 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX2P48431 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX2P48431 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX2P48431 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SOX2P48431 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX2P48431 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SOX2P48431 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX2P48431 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SOX2P48431 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
SOX2P48431 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
SOX2P48431 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
SOX2P48431 AL023806.1-201ENST00000603994 1649 ntBASIC15.83■□□□□ 0.13
SOX2P48431 AL355312.1-201ENST00000407115 2176 ntBASIC15.83■□□□□ 0.13
SOX2P48431 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
SOX2P48431 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.83■□□□□ 0.13
SOX2P48431 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SOX2P48431 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
SOX2P48431 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX2P48431 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX2P48431 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SOX2P48431 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.83■□□□□ 0.12
SOX2P48431 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX2P48431 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.83■□□□□ 0.12
SOX2P48431 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.83■□□□□ 0.12
SOX2P48431 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.83■□□□□ 0.12
SOX2P48431 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.83■□□□□ 0.12
SOX2P48431 MIR4651-201ENST00000582622 73 ntBASIC15.83■□□□□ 0.12
SOX2P48431 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.83■□□□□ 0.12
SOX2P48431 DGCR10-201ENST00000609839 495 ntBASIC15.83■□□□□ 0.12
SOX2P48431 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX2P48431 AC084018.2-201ENST00000613093 2607 ntBASIC15.83■□□□□ 0.12
SOX2P48431 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX2P48431 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.83■□□□□ 0.12
SOX2P48431 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX2P48431 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX2P48431 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX2P48431 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SOX2P48431 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX2P48431 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX2P48431 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX2P48431 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SOX2P48431 AD000864.1-201ENST00000624076 2295 ntBASIC15.83■□□□□ 0.12
SOX2P48431 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX2P48431 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SOX2P48431 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX2P48431 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX2P48431 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX2P48431 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.82■□□□□ 0.12
SOX2P48431 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SOX2P48431 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX2P48431 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX2P48431 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SOX2P48431 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX2P48431 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX2P48431 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX2P48431 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
SOX2P48431 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SOX2P48431 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX2P48431 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SOX2P48431 CRYGFP-201ENST00000418459 633 ntBASIC15.82■□□□□ 0.12
SOX2P48431 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SOX2P48431 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SOX2P48431 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms