Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.28■□□□□ 0.2
GDF1P27539 AC090164.3-201ENST00000610780 2143 ntBASIC16.28■□□□□ 0.2
GDF1P27539 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDF1P27539 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GDF1P27539 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
GDF1P27539 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDF1P27539 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
GDF1P27539 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
GDF1P27539 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
GDF1P27539 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.28■□□□□ 0.2
GDF1P27539 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GDF1P27539 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDF1P27539 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDF1P27539 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDF1P27539 AL096828.2-201ENST00000567259 1965 ntBASIC16.28■□□□□ 0.2
GDF1P27539 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDF1P27539 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDF1P27539 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDF1P27539 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDF1P27539 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDF1P27539 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.28■□□□□ 0.2
GDF1P27539 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDF1P27539 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GDF1P27539 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.28■□□□□ 0.2
GDF1P27539 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.28■□□□□ 0.2
GDF1P27539 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.28■□□□□ 0.2
GDF1P27539 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.28■□□□□ 0.2
GDF1P27539 BNIP3P18-201ENST00000593976 575 ntBASIC16.28■□□□□ 0.2
GDF1P27539 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDF1P27539 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDF1P27539 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
GDF1P27539 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDF1P27539 AC135776.1-201ENST00000319817 2481 ntBASIC16.27■□□□□ 0.2
GDF1P27539 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GDF1P27539 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GDF1P27539 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.27■□□□□ 0.2
GDF1P27539 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GDF1P27539 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GDF1P27539 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GDF1P27539 AC022898.2-201ENST00000616822 1312 ntBASIC16.27■□□□□ 0.2
GDF1P27539 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GDF1P27539 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GDF1P27539 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.27■□□□□ 0.2
GDF1P27539 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
GDF1P27539 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.27■□□□□ 0.2
GDF1P27539 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.27■□□□□ 0.2
GDF1P27539 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.27■□□□□ 0.2
GDF1P27539 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GDF1P27539 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
GDF1P27539 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GDF1P27539 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GDF1P27539 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GDF1P27539 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.27■□□□□ 0.19
GDF1P27539 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.27■□□□□ 0.19
GDF1P27539 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.27■□□□□ 0.19
GDF1P27539 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
GDF1P27539 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
GDF1P27539 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.27■□□□□ 0.19
GDF1P27539 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
GDF1P27539 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GDF1P27539 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
GDF1P27539 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GDF1P27539 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.27■□□□□ 0.19
GDF1P27539 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.26■□□□□ 0.19
GDF1P27539 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GDF1P27539 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GDF1P27539 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.26■□□□□ 0.19
GDF1P27539 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GDF1P27539 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GDF1P27539 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GDF1P27539 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
GDF1P27539 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GDF1P27539 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.26■□□□□ 0.19
GDF1P27539 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.26■□□□□ 0.19
GDF1P27539 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.26■□□□□ 0.19
GDF1P27539 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GDF1P27539 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
GDF1P27539 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GDF1P27539 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GDF1P27539 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.26■□□□□ 0.19
GDF1P27539 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.26■□□□□ 0.19
GDF1P27539 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.26■□□□□ 0.19
GDF1P27539 AC009533.2-201ENST00000543664 586 ntBASIC16.26■□□□□ 0.19
GDF1P27539 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
GDF1P27539 AL591684.3-201ENST00000605187 298 ntBASIC16.26■□□□□ 0.19
GDF1P27539 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GDF1P27539 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
GDF1P27539 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GDF1P27539 AC093677.2-201ENST00000600169 1863 ntBASIC16.26■□□□□ 0.19
GDF1P27539 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GDF1P27539 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
GDF1P27539 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GDF1P27539 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
GDF1P27539 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.26■□□□□ 0.19
GDF1P27539 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GDF1P27539 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
GDF1P27539 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
GDF1P27539 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
GDF1P27539 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.25■□□□□ 0.19
GDF1P27539 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms