Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRD2P25440 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.3■□□□□ 0.68
BRD2P25440 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BRD2P25440 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.3■□□□□ 0.68
BRD2P25440 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRD2P25440 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
BRD2P25440 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BRD2P25440 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRD2P25440 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRD2P25440 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.3■□□□□ 0.68
BRD2P25440 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.3■□□□□ 0.68
BRD2P25440 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.3■□□□□ 0.68
BRD2P25440 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.3■□□□□ 0.68
BRD2P25440 KRT18P48-201ENST00000434763 852 ntBASIC19.3■□□□□ 0.68
BRD2P25440 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.3■□□□□ 0.68
BRD2P25440 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.3■□□□□ 0.68
BRD2P25440 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.3■□□□□ 0.68
BRD2P25440 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.3■□□□□ 0.68
BRD2P25440 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.3■□□□□ 0.68
BRD2P25440 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.3■□□□□ 0.68
BRD2P25440 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.3■□□□□ 0.68
BRD2P25440 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
BRD2P25440 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRD2P25440 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRD2P25440 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BRD2P25440 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRD2P25440 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BRD2P25440 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
BRD2P25440 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRD2P25440 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRD2P25440 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRD2P25440 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.3■□□□□ 0.68
BRD2P25440 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRD2P25440 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRD2P25440 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRD2P25440 LINC00602-201ENST00000629776 2065 ntBASIC19.29■□□□□ 0.68
BRD2P25440 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.29■□□□□ 0.68
BRD2P25440 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
BRD2P25440 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.29■□□□□ 0.68
BRD2P25440 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRD2P25440 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRD2P25440 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRD2P25440 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRD2P25440 LINC00167-201ENST00000530583 1419 ntBASIC19.29■□□□□ 0.68
BRD2P25440 AP000997.3-201ENST00000623333 2250 ntBASIC19.29■□□□□ 0.68
BRD2P25440 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
BRD2P25440 MIR662-201ENST00000384847 95 ntBASIC19.29■□□□□ 0.68
BRD2P25440 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
BRD2P25440 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
BRD2P25440 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRD2P25440 ZNF444P1-201ENST00000559497 298 ntBASIC19.29■□□□□ 0.68
BRD2P25440 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.29■□□□□ 0.68
BRD2P25440 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
BRD2P25440 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRD2P25440 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.29■□□□□ 0.68
BRD2P25440 AC138028.4-201ENST00000564984 1845 ntBASIC19.29■□□□□ 0.68
BRD2P25440 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.29■□□□□ 0.68
BRD2P25440 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRD2P25440 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRD2P25440 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRD2P25440 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.29■□□□□ 0.68
BRD2P25440 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRD2P25440 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
BRD2P25440 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.29■□□□□ 0.68
BRD2P25440 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRD2P25440 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRD2P25440 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.28■□□□□ 0.68
BRD2P25440 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRD2P25440 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.28■□□□□ 0.68
BRD2P25440 AC012313.1-201ENST00000593393 3059 ntBASIC19.28■□□□□ 0.68
BRD2P25440 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRD2P25440 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRD2P25440 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRD2P25440 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRD2P25440 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.28■□□□□ 0.68
BRD2P25440 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.28■□□□□ 0.68
BRD2P25440 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
BRD2P25440 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.28■□□□□ 0.68
BRD2P25440 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.28■□□□□ 0.68
BRD2P25440 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRD2P25440 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.28■□□□□ 0.68
BRD2P25440 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.28■□□□□ 0.68
BRD2P25440 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRD2P25440 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRD2P25440 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.28■□□□□ 0.68
BRD2P25440 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.28■□□□□ 0.68
BRD2P25440 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
BRD2P25440 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRD2P25440 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BRD2P25440 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC19.27■□□□□ 0.68
BRD2P25440 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRD2P25440 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.27■□□□□ 0.68
BRD2P25440 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BRD2P25440 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
BRD2P25440 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRD2P25440 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRD2P25440 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BRD2P25440 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BRD2P25440 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BRD2P25440 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms