Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP8P22894 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.9■□□□□ 0.62
MMP8P22894 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.9■□□□□ 0.62
MMP8P22894 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP8P22894 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.9■□□□□ 0.62
MMP8P22894 AL645929.1-201ENST00000420084 975 ntBASIC18.9■□□□□ 0.62
MMP8P22894 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MMP8P22894 AC068472.1-201ENST00000474589 881 ntBASIC18.9■□□□□ 0.62
MMP8P22894 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.9■□□□□ 0.62
MMP8P22894 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
MMP8P22894 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.9■□□□□ 0.62
MMP8P22894 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.9■□□□□ 0.62
MMP8P22894 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.9■□□□□ 0.62
MMP8P22894 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.9■□□□□ 0.62
MMP8P22894 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP8P22894 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP8P22894 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.9■□□□□ 0.62
MMP8P22894 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MMP8P22894 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP8P22894 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
MMP8P22894 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP8P22894 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP8P22894 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP8P22894 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.89■□□□□ 0.62
MMP8P22894 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
MMP8P22894 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
MMP8P22894 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
MMP8P22894 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MMP8P22894 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.89■□□□□ 0.61
MMP8P22894 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MMP8P22894 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
MMP8P22894 AL136038.3-201ENST00000561909 1096 ntBASIC18.89■□□□□ 0.61
MMP8P22894 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
MMP8P22894 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MMP8P22894 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.89■□□□□ 0.61
MMP8P22894 AC116407.2-201ENST00000613639 860 ntBASIC18.89■□□□□ 0.61
MMP8P22894 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.89■□□□□ 0.61
MMP8P22894 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MMP8P22894 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.89■□□□□ 0.61
MMP8P22894 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
MMP8P22894 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MMP8P22894 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
MMP8P22894 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MMP8P22894 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MMP8P22894 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.89■□□□□ 0.61
MMP8P22894 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MMP8P22894 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
MMP8P22894 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MMP8P22894 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MMP8P22894 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
MMP8P22894 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
MMP8P22894 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
MMP8P22894 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MMP8P22894 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
MMP8P22894 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
MMP8P22894 AL031133.1-201ENST00000406807 723 ntBASIC18.88■□□□□ 0.61
MMP8P22894 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MMP8P22894 MTCL1P1-201ENST00000446207 792 ntBASIC18.88■□□□□ 0.61
MMP8P22894 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MMP8P22894 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.88■□□□□ 0.61
MMP8P22894 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.88■□□□□ 0.61
MMP8P22894 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.88■□□□□ 0.61
MMP8P22894 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.88■□□□□ 0.61
MMP8P22894 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
MMP8P22894 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MMP8P22894 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
MMP8P22894 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
MMP8P22894 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.88■□□□□ 0.61
MMP8P22894 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
MMP8P22894 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MMP8P22894 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.88■□□□□ 0.61
MMP8P22894 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.88■□□□□ 0.61
MMP8P22894 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.88■□□□□ 0.61
MMP8P22894 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.88■□□□□ 0.61
MMP8P22894 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
MMP8P22894 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MMP8P22894 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MMP8P22894 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MMP8P22894 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
MMP8P22894 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MMP8P22894 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MMP8P22894 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MMP8P22894 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MMP8P22894 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.87■□□□□ 0.61
MMP8P22894 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MMP8P22894 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.87■□□□□ 0.61
MMP8P22894 AL355312.1-201ENST00000407115 2176 ntBASIC18.87■□□□□ 0.61
MMP8P22894 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
MMP8P22894 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
MMP8P22894 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
MMP8P22894 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.87■□□□□ 0.61
MMP8P22894 DDX43P3-201ENST00000441064 443 ntBASIC18.87■□□□□ 0.61
MMP8P22894 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.87■□□□□ 0.61
MMP8P22894 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.87■□□□□ 0.61
MMP8P22894 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.87■□□□□ 0.61
MMP8P22894 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.87■□□□□ 0.61
MMP8P22894 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.87■□□□□ 0.61
MMP8P22894 AL049597.2-201ENST00000565575 961 ntBASIC18.87■□□□□ 0.61
MMP8P22894 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
MMP8P22894 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms