Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB3BP20337 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.78■□□□□ 0.12
RAB3BP20337 KRASP1-201ENST00000407852 552 ntBASIC15.78■□□□□ 0.12
RAB3BP20337 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB3BP20337 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB3BP20337 UNC93B5-201ENST00000530315 699 ntBASIC15.78■□□□□ 0.12
RAB3BP20337 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RAB3BP20337 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.78■□□□□ 0.12
RAB3BP20337 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB3BP20337 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB3BP20337 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB3BP20337 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB3BP20337 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB3BP20337 AL356309.3-201ENST00000624132 1934 ntBASIC15.78■□□□□ 0.12
RAB3BP20337 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB3BP20337 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.78■□□□□ 0.12
RAB3BP20337 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RAB3BP20337 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RAB3BP20337 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RAB3BP20337 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RAB3BP20337 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RAB3BP20337 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB3BP20337 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RAB3BP20337 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.77■□□□□ 0.12
RAB3BP20337 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RAB3BP20337 KRT17P3-201ENST00000420566 1262 ntBASIC15.77■□□□□ 0.12
RAB3BP20337 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
RAB3BP20337 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.77■□□□□ 0.12
RAB3BP20337 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RAB3BP20337 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RAB3BP20337 AC133041.1-202ENST00000642053 222 ntBASIC15.77■□□□□ 0.12
RAB3BP20337 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB3BP20337 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB3BP20337 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.77■□□□□ 0.11
RAB3BP20337 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RAB3BP20337 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB3BP20337 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RAB3BP20337 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB3BP20337 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB3BP20337 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
RAB3BP20337 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.77■□□□□ 0.11
RAB3BP20337 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.76■□□□□ 0.11
RAB3BP20337 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB3BP20337 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB3BP20337 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAB3BP20337 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAB3BP20337 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RAB3BP20337 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RAB3BP20337 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB3BP20337 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB3BP20337 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.76■□□□□ 0.11
RAB3BP20337 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB3BP20337 AL391005.1-201ENST00000623953 2435 ntBASIC15.76■□□□□ 0.11
RAB3BP20337 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB3BP20337 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB3BP20337 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.76■□□□□ 0.11
RAB3BP20337 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB3BP20337 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
RAB3BP20337 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.76■□□□□ 0.11
RAB3BP20337 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAB3BP20337 AC239809.2-201ENST00000415381 517 ntBASIC15.76■□□□□ 0.11
RAB3BP20337 FAM207BP-201ENST00000447172 505 ntBASIC15.76■□□□□ 0.11
RAB3BP20337 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.76■□□□□ 0.11
RAB3BP20337 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.76■□□□□ 0.11
RAB3BP20337 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.76■□□□□ 0.11
RAB3BP20337 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.76■□□□□ 0.11
RAB3BP20337 AC008403.3-201ENST00000598924 454 ntBASIC15.76■□□□□ 0.11
RAB3BP20337 AC069544.1-201ENST00000609399 999 ntBASIC15.76■□□□□ 0.11
RAB3BP20337 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.76■□□□□ 0.11
RAB3BP20337 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAB3BP20337 AL023875.1-201ENST00000640777 796 ntBASIC15.76■□□□□ 0.11
RAB3BP20337 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
RAB3BP20337 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB3BP20337 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB3BP20337 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB3BP20337 AC018695.7-201ENST00000624587 2492 ntBASIC15.76■□□□□ 0.11
RAB3BP20337 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.76■□□□□ 0.11
RAB3BP20337 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB3BP20337 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
RAB3BP20337 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.76■□□□□ 0.11
RAB3BP20337 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB3BP20337 GPAT2P1-201ENST00000444924 1672 ntBASIC15.76■□□□□ 0.11
RAB3BP20337 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RAB3BP20337 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.76■□□□□ 0.11
RAB3BP20337 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAB3BP20337 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
RAB3BP20337 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB3BP20337 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.76■□□□□ 0.11
RAB3BP20337 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB3BP20337 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.75■□□□□ 0.11
RAB3BP20337 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB3BP20337 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RAB3BP20337 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB3BP20337 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.75■□□□□ 0.11
RAB3BP20337 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB3BP20337 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.75■□□□□ 0.11
RAB3BP20337 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RAB3BP20337 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RAB3BP20337 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.75■□□□□ 0.11
RAB3BP20337 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms