Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 AC009154.2-201ENST00000621177 724 ntBASIC18.16■□□□□ 0.5
HLA-DPA1P20036 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 AL353692.3-201ENST00000407031 1396 ntBASIC18.16■□□□□ 0.5
HLA-DPA1P20036 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 AL645929.1-201ENST00000420084 975 ntBASIC18.15■□□□□ 0.5
HLA-DPA1P20036 TSPY12P-201ENST00000421279 868 ntBASIC18.15■□□□□ 0.5
HLA-DPA1P20036 AL136038.3-201ENST00000561909 1096 ntBASIC18.15■□□□□ 0.5
HLA-DPA1P20036 AC005332.3-201ENST00000589904 676 ntBASIC18.15■□□□□ 0.5
HLA-DPA1P20036 AL390719.2-201ENST00000606993 987 ntBASIC18.15■□□□□ 0.5
HLA-DPA1P20036 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.15■□□□□ 0.5
HLA-DPA1P20036 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DPA1P20036 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HLA-DPA1P20036 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
HLA-DPA1P20036 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
HLA-DPA1P20036 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
HLA-DPA1P20036 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DPA1P20036 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.14■□□□□ 0.49
HLA-DPA1P20036 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DPA1P20036 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DPA1P20036 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DPA1P20036 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.14■□□□□ 0.49
HLA-DPA1P20036 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DPA1P20036 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.14■□□□□ 0.49
HLA-DPA1P20036 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.14■□□□□ 0.49
HLA-DPA1P20036 AL121956.5-201ENST00000625261 221 ntBASIC18.14■□□□□ 0.49
HLA-DPA1P20036 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DPA1P20036 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DPA1P20036 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DPA1P20036 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.14■□□□□ 0.49
HLA-DPA1P20036 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
HLA-DPA1P20036 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.14■□□□□ 0.49
HLA-DPA1P20036 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DPA1P20036 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DPA1P20036 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DPA1P20036 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.14■□□□□ 0.49
HLA-DPA1P20036 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HLA-DPA1P20036 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms