Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.06■□□□□ 0.48
THRAP10827 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.06■□□□□ 0.48
THRAP10827 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.06■□□□□ 0.48
THRAP10827 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
THRAP10827 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
THRAP10827 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
THRAP10827 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
THRAP10827 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
THRAP10827 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.06■□□□□ 0.48
THRAP10827 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.06■□□□□ 0.48
THRAP10827 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
THRAP10827 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.05■□□□□ 0.48
THRAP10827 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
THRAP10827 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.05■□□□□ 0.48
THRAP10827 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
THRAP10827 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
THRAP10827 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
THRAP10827 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
THRAP10827 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
THRAP10827 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.05■□□□□ 0.48
THRAP10827 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
THRAP10827 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THRAP10827 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
THRAP10827 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.05■□□□□ 0.48
THRAP10827 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.05■□□□□ 0.48
THRAP10827 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.05■□□□□ 0.48
THRAP10827 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.05■□□□□ 0.48
THRAP10827 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.05■□□□□ 0.48
THRAP10827 AC024243.1-201ENST00000609234 778 ntBASIC18.05■□□□□ 0.48
THRAP10827 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
THRAP10827 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THRAP10827 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.05■□□□□ 0.48
THRAP10827 AC093677.2-201ENST00000600169 1863 ntBASIC18.05■□□□□ 0.48
THRAP10827 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THRAP10827 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
THRAP10827 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.05■□□□□ 0.48
THRAP10827 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.05■□□□□ 0.48
THRAP10827 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.04■□□□□ 0.48
THRAP10827 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.04■□□□□ 0.48
THRAP10827 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.04■□□□□ 0.48
THRAP10827 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.04■□□□□ 0.48
THRAP10827 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
THRAP10827 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.04■□□□□ 0.48
THRAP10827 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THRAP10827 MTMR9LP-203ENST00000426597 1545 ntBASIC18.04■□□□□ 0.48
THRAP10827 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
THRAP10827 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
THRAP10827 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THRAP10827 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THRAP10827 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
THRAP10827 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.04■□□□□ 0.48
THRAP10827 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THRAP10827 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THRAP10827 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
THRAP10827 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.04■□□□□ 0.48
THRAP10827 KRT18P48-201ENST00000434763 852 ntBASIC18.04■□□□□ 0.48
THRAP10827 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
THRAP10827 HCG4P8-203ENST00000443049 980 ntBASIC18.04■□□□□ 0.48
THRAP10827 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.04■□□□□ 0.48
THRAP10827 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.04■□□□□ 0.48
THRAP10827 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
THRAP10827 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.04■□□□□ 0.48
THRAP10827 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.04■□□□□ 0.48
THRAP10827 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.04■□□□□ 0.48
THRAP10827 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.04■□□□□ 0.48
THRAP10827 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.04■□□□□ 0.48
THRAP10827 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
THRAP10827 AC112777.1-201ENST00000540175 1423 ntBASIC18.04■□□□□ 0.48
THRAP10827 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THRAP10827 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.04■□□□□ 0.48
THRAP10827 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.04■□□□□ 0.48
THRAP10827 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THRAP10827 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THRAP10827 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THRAP10827 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THRAP10827 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.04■□□□□ 0.48
THRAP10827 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
THRAP10827 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
THRAP10827 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
THRAP10827 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
THRAP10827 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
THRAP10827 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.03■□□□□ 0.48
THRAP10827 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
THRAP10827 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.03■□□□□ 0.48
THRAP10827 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
THRAP10827 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
THRAP10827 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.03■□□□□ 0.48
THRAP10827 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
THRAP10827 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
THRAP10827 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.03■□□□□ 0.48
THRAP10827 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.03■□□□□ 0.48
THRAP10827 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.03■□□□□ 0.48
THRAP10827 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.03■□□□□ 0.48
THRAP10827 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.03■□□□□ 0.48
THRAP10827 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
THRAP10827 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
THRAP10827 AC068587.9-201ENST00000641814 219 ntBASIC18.03■□□□□ 0.48
THRAP10827 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
THRAP10827 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.03■□□□□ 0.48
THRAP10827 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms