Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SMIM17P0DL12 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SMIM17P0DL12 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SMIM17P0DL12 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.42□□□□□ -0.26
SMIM17P0DL12 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC13.42□□□□□ -0.26
SMIM17P0DL12 KRT17P3-201ENST00000420566 1262 ntBASIC13.42□□□□□ -0.26
SMIM17P0DL12 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
SMIM17P0DL12 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.42□□□□□ -0.26
SMIM17P0DL12 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SMIM17P0DL12 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SMIM17P0DL12 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.42□□□□□ -0.26
SMIM17P0DL12 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SMIM17P0DL12 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SMIM17P0DL12 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.42□□□□□ -0.26
SMIM17P0DL12 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
SMIM17P0DL12 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 REXO1L9P-201ENST00000604264 2108 ntBASIC13.42□□□□□ -0.26
SMIM17P0DL12 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SMIM17P0DL12 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMIM17P0DL12 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SMIM17P0DL12 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.41□□□□□ -0.26
SMIM17P0DL12 MYLKP1-201ENST00000509077 1580 ntBASIC13.41□□□□□ -0.26
SMIM17P0DL12 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.41□□□□□ -0.26
SMIM17P0DL12 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SMIM17P0DL12 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SMIM17P0DL12 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.41□□□□□ -0.26
SMIM17P0DL12 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.41□□□□□ -0.26
SMIM17P0DL12 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SMIM17P0DL12 GUSBP6-202ENST00000438529 1198 ntBASIC13.41□□□□□ -0.26
SMIM17P0DL12 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.41□□□□□ -0.26
SMIM17P0DL12 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.41□□□□□ -0.26
SMIM17P0DL12 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.41□□□□□ -0.26
SMIM17P0DL12 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SMIM17P0DL12 CICP6-201ENST00000457191 2729 ntBASIC13.41□□□□□ -0.26
SMIM17P0DL12 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
SMIM17P0DL12 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.41□□□□□ -0.26
SMIM17P0DL12 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.41□□□□□ -0.26
SMIM17P0DL12 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.41□□□□□ -0.26
SMIM17P0DL12 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
SMIM17P0DL12 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
SMIM17P0DL12 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SMIM17P0DL12 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC13.41□□□□□ -0.26
SMIM17P0DL12 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
SMIM17P0DL12 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMIM17P0DL12 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMIM17P0DL12 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms