Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD48P09326 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD48P09326 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.63■□□□□ 0.57
CD48P09326 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD48P09326 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD48P09326 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.63■□□□□ 0.57
CD48P09326 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD48P09326 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD48P09326 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD48P09326 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD48P09326 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD48P09326 MIR662-201ENST00000384847 95 ntBASIC18.63■□□□□ 0.57
CD48P09326 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.63■□□□□ 0.57
CD48P09326 FAM8A6P-201ENST00000407496 1135 ntBASIC18.63■□□□□ 0.57
CD48P09326 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CD48P09326 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CD48P09326 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.63■□□□□ 0.57
CD48P09326 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.63■□□□□ 0.57
CD48P09326 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD48P09326 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CD48P09326 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CD48P09326 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD48P09326 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD48P09326 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD48P09326 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD48P09326 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD48P09326 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD48P09326 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.63■□□□□ 0.57
CD48P09326 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD48P09326 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD48P09326 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD48P09326 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CD48P09326 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CD48P09326 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD48P09326 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.62■□□□□ 0.57
CD48P09326 AL355312.1-201ENST00000407115 2176 ntBASIC18.62■□□□□ 0.57
CD48P09326 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD48P09326 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD48P09326 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD48P09326 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD48P09326 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD48P09326 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.62■□□□□ 0.57
CD48P09326 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD48P09326 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CD48P09326 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CD48P09326 DUX4L26-201ENST00000489078 1255 ntBASIC18.62■□□□□ 0.57
CD48P09326 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.62■□□□□ 0.57
CD48P09326 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.62■□□□□ 0.57
CD48P09326 AC083849.1-201ENST00000615227 514 ntBASIC18.62■□□□□ 0.57
CD48P09326 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.62■□□□□ 0.57
CD48P09326 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
CD48P09326 KRT8P47-201ENST00000604727 1398 ntBASIC18.62■□□□□ 0.57
CD48P09326 LINC01311-201ENST00000565162 1445 ntBASIC18.62■□□□□ 0.57
CD48P09326 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD48P09326 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD48P09326 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD48P09326 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CD48P09326 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CD48P09326 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD48P09326 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CD48P09326 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CD48P09326 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
CD48P09326 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD48P09326 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD48P09326 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.62■□□□□ 0.57
CD48P09326 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD48P09326 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD48P09326 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD48P09326 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD48P09326 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD48P09326 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD48P09326 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD48P09326 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.61■□□□□ 0.57
CD48P09326 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD48P09326 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD48P09326 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CD48P09326 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD48P09326 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD48P09326 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CD48P09326 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CD48P09326 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.61■□□□□ 0.57
CD48P09326 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.61■□□□□ 0.57
CD48P09326 TMPOP1-202ENST00000424642 1267 ntBASIC18.61■□□□□ 0.57
CD48P09326 AC092647.4-201ENST00000457211 535 ntBASIC18.61■□□□□ 0.57
CD48P09326 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.61■□□□□ 0.57
CD48P09326 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
CD48P09326 AC022616.7-201ENST00000525383 220 ntBASIC18.61■□□□□ 0.57
CD48P09326 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.61■□□□□ 0.57
CD48P09326 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.61■□□□□ 0.57
CD48P09326 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CD48P09326 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.61■□□□□ 0.57
CD48P09326 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD48P09326 AC009949.1-201ENST00000623048 1830 ntBASIC18.6■□□□□ 0.57
CD48P09326 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD48P09326 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
CD48P09326 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD48P09326 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD48P09326 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CD48P09326 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD48P09326 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms