Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 AC006116.8-202ENST00000587620 1550 ntBASIC18.23■□□□□ 0.51
HLA-DQB2P05538 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 AC068472.1-201ENST00000474589 881 ntBASIC18.23■□□□□ 0.51
HLA-DQB2P05538 AC112698.1-201ENST00000510299 916 ntBASIC18.23■□□□□ 0.51
HLA-DQB2P05538 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.23■□□□□ 0.51
HLA-DQB2P05538 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 AC005332.8-201ENST00000622750 2735 ntBASIC18.23■□□□□ 0.51
HLA-DQB2P05538 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DQB2P05538 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 MTCL1P1-201ENST00000446207 792 ntBASIC18.22■□□□□ 0.51
HLA-DQB2P05538 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DQB2P05538 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB2P05538 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB2P05538 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB2P05538 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.21■□□□□ 0.51
HLA-DQB2P05538 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB2P05538 IER3-202ENST00000376377 1350 ntBASIC18.21■□□□□ 0.51
HLA-DQB2P05538 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB2P05538 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.21■□□□□ 0.51
HLA-DQB2P05538 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HLA-DQB2P05538 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB2P05538 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB2P05538 ARMC10P1-201ENST00000313754 855 ntBASIC18.21■□□□□ 0.51
HLA-DQB2P05538 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB2P05538 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.21■□□□□ 0.51
HLA-DQB2P05538 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB2P05538 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB2P05538 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
HLA-DQB2P05538 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.21■□□□□ 0.51
HLA-DQB2P05538 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.21■□□□□ 0.51
HLA-DQB2P05538 KRT8P26-201ENST00000534154 1276 ntBASIC18.21■□□□□ 0.51
HLA-DQB2P05538 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.21■□□□□ 0.51
HLA-DQB2P05538 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB2P05538 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB2P05538 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB2P05538 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB2P05538 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB2P05538 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.5
HLA-DQB2P05538 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
HLA-DQB2P05538 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
HLA-DQB2P05538 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQB2P05538 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQB2P05538 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQB2P05538 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms