Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
APPP05067 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.55■■□□□ 1.04
APPP05067 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.55■■□□□ 1.04
APPP05067 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
APPP05067 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.55■■□□□ 1.04
APPP05067 DRAXINP1-201ENST00000437611 948 ntBASIC21.55■■□□□ 1.04
APPP05067 KRT18P65-201ENST00000439811 1286 ntBASIC21.55■■□□□ 1.04
APPP05067 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
APPP05067 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.55■■□□□ 1.04
APPP05067 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
APPP05067 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
APPP05067 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.55■■□□□ 1.04
APPP05067 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
APPP05067 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
APPP05067 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
APPP05067 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
APPP05067 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
APPP05067 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
APPP05067 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC21.55■■□□□ 1.04
APPP05067 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
APPP05067 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
APPP05067 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
APPP05067 NEFHP1-201ENST00000412845 2629 ntBASIC21.55■■□□□ 1.04
APPP05067 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
APPP05067 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
APPP05067 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
APPP05067 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.55■■□□□ 1.04
APPP05067 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
APPP05067 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
APPP05067 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
APPP05067 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
APPP05067 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
APPP05067 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.54■■□□□ 1.04
APPP05067 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.54■■□□□ 1.04
APPP05067 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.54■■□□□ 1.04
APPP05067 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
APPP05067 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
APPP05067 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
APPP05067 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
APPP05067 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.54■■□□□ 1.04
APPP05067 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.54■■□□□ 1.04
APPP05067 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.54■■□□□ 1.04
APPP05067 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
APPP05067 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
APPP05067 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
APPP05067 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
APPP05067 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
APPP05067 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.54■■□□□ 1.04
APPP05067 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
APPP05067 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
APPP05067 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
APPP05067 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
APPP05067 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
APPP05067 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.53■■□□□ 1.04
APPP05067 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
APPP05067 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
APPP05067 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
APPP05067 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
APPP05067 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
APPP05067 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.53■■□□□ 1.04
APPP05067 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
APPP05067 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.53■■□□□ 1.04
APPP05067 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.53■■□□□ 1.04
APPP05067 MTCL1P1-201ENST00000446207 792 ntBASIC21.53■■□□□ 1.04
APPP05067 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.53■■□□□ 1.04
APPP05067 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
APPP05067 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.53■■□□□ 1.04
APPP05067 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
APPP05067 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.53■■□□□ 1.04
APPP05067 BICD1-207ENST00000551848 1962 ntBASIC21.53■■□□□ 1.04
APPP05067 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
APPP05067 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
APPP05067 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
APPP05067 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.53■■□□□ 1.04
APPP05067 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
APPP05067 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.53■■□□□ 1.04
APPP05067 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
APPP05067 LETM1P2-201ENST00000597330 2178 ntBASIC21.53■■□□□ 1.04
APPP05067 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.52■■□□□ 1.04
APPP05067 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
APPP05067 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
APPP05067 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
APPP05067 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
APPP05067 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
APPP05067 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.52■■□□□ 1.04
APPP05067 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.52■■□□□ 1.04
APPP05067 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
APPP05067 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.52■■□□□ 1.04
APPP05067 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.52■■□□□ 1.04
APPP05067 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.52■■□□□ 1.04
APPP05067 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
APPP05067 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
APPP05067 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
APPP05067 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
APPP05067 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
APPP05067 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
APPP05067 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
APPP05067 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.52■■□□□ 1.04
APPP05067 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
APPP05067 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms