Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.4■□□□□ 0.22
P04436 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04436 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04436 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
P04436 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
P04436 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.4■□□□□ 0.22
P04436 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04436 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.4■□□□□ 0.22
P04436 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.4■□□□□ 0.22
P04436 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.4■□□□□ 0.22
P04436 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.4■□□□□ 0.22
P04436 AC005336.2-201ENST00000593183 939 ntBASIC16.4■□□□□ 0.22
P04436 BNIP3P18-201ENST00000593976 575 ntBASIC16.4■□□□□ 0.22
P04436 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.4■□□□□ 0.22
P04436 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.4■□□□□ 0.22
P04436 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
P04436 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.4■□□□□ 0.22
P04436 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
P04436 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
P04436 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
P04436 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
P04436 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
P04436 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04436 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
P04436 AC090164.3-201ENST00000610780 2143 ntBASIC16.4■□□□□ 0.22
P04436 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.4■□□□□ 0.22
P04436 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.4■□□□□ 0.22
P04436 AL096828.2-201ENST00000567259 1965 ntBASIC16.4■□□□□ 0.22
P04436 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04436 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04436 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04436 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
P04436 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04436 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.4■□□□□ 0.22
P04436 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.4■□□□□ 0.22
P04436 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
P04436 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
P04436 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
P04436 RNF165-205ENST00000588679 2904 ntBASIC16.39■□□□□ 0.21
P04436 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
P04436 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04436 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04436 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04436 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.39■□□□□ 0.21
P04436 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.39■□□□□ 0.21
P04436 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04436 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
P04436 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.39■□□□□ 0.21
P04436 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04436 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04436 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
P04436 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.39■□□□□ 0.21
P04436 FAAHP1-202ENST00000446499 1238 ntBASIC16.39■□□□□ 0.21
P04436 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.39■□□□□ 0.21
P04436 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.39■□□□□ 0.21
P04436 UNC93B7-201ENST00000509439 705 ntBASIC16.39■□□□□ 0.21
P04436 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.39■□□□□ 0.21
P04436 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
P04436 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
P04436 AL591684.3-201ENST00000605187 298 ntBASIC16.39■□□□□ 0.21
P04436 AC114341.1-201ENST00000618070 349 ntBASIC16.39■□□□□ 0.21
P04436 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04436 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04436 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04436 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.39■□□□□ 0.21
P04436 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04436 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04436 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04436 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.39■□□□□ 0.21
P04436 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
P04436 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04436 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.38■□□□□ 0.21
P04436 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04436 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04436 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04436 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04436 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04436 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04436 AC093677.2-201ENST00000600169 1863 ntBASIC16.38■□□□□ 0.21
P04436 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
P04436 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
P04436 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
P04436 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
P04436 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.38■□□□□ 0.21
P04436 TP73-AS1-210ENST00000637775 1455 ntBASIC16.38■□□□□ 0.21
P04436 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.38■□□□□ 0.21
P04436 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
P04436 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
P04436 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04436 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.38■□□□□ 0.21
P04436 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.38■□□□□ 0.21
P04436 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
P04436 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.38■□□□□ 0.21
P04436 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.38■□□□□ 0.21
P04436 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
P04436 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.38■□□□□ 0.21
P04436 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04436 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
P04436 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.38■□□□□ 0.21
P04436 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms