Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 TSPY14P-201ENST00000303979 915 ntBASIC16.17■□□□□ 0.18
HLA-DQA2P01906 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 EGLN1P1-201ENST00000531623 762 ntBASIC16.17■□□□□ 0.18
HLA-DQA2P01906 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 NAPSB-206ENST00000562112 1266 ntBASIC16.17■□□□□ 0.18
HLA-DQA2P01906 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQA2P01906 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 MIR4497-201ENST00000583208 89 ntBASIC16.16■□□□□ 0.18
HLA-DQA2P01906 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 LINC01126-201ENST00000623515 1646 ntBASIC16.16■□□□□ 0.18
HLA-DQA2P01906 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DQA2P01906 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
HLA-DQA2P01906 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms