Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CLIC3O95833 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.62■□□□□ 0.25
CLIC3O95833 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLIC3O95833 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLIC3O95833 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.62■□□□□ 0.25
CLIC3O95833 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.62■□□□□ 0.25
CLIC3O95833 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.62■□□□□ 0.25
CLIC3O95833 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLIC3O95833 AC006970.2-201ENST00000450065 779 ntBASIC16.62■□□□□ 0.25
CLIC3O95833 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.62■□□□□ 0.25
CLIC3O95833 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLIC3O95833 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.62■□□□□ 0.25
CLIC3O95833 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.62■□□□□ 0.25
CLIC3O95833 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.62■□□□□ 0.25
CLIC3O95833 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.62■□□□□ 0.25
CLIC3O95833 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.62■□□□□ 0.25
CLIC3O95833 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLIC3O95833 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLIC3O95833 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.62■□□□□ 0.25
CLIC3O95833 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLIC3O95833 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLIC3O95833 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLIC3O95833 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.62■□□□□ 0.25
CLIC3O95833 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLIC3O95833 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLIC3O95833 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.62■□□□□ 0.25
CLIC3O95833 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.62■□□□□ 0.25
CLIC3O95833 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.62■□□□□ 0.25
CLIC3O95833 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLIC3O95833 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLIC3O95833 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLIC3O95833 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLIC3O95833 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CLIC3O95833 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLIC3O95833 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
CLIC3O95833 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
CLIC3O95833 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.61■□□□□ 0.25
CLIC3O95833 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLIC3O95833 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLIC3O95833 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
CLIC3O95833 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLIC3O95833 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CLIC3O95833 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLIC3O95833 MIR663A-201ENST00000385250 93 ntBASIC16.61■□□□□ 0.25
CLIC3O95833 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLIC3O95833 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CLIC3O95833 AC026185.1-201ENST00000445748 174 ntBASIC16.61■□□□□ 0.25
CLIC3O95833 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLIC3O95833 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.61■□□□□ 0.25
CLIC3O95833 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.61■□□□□ 0.25
CLIC3O95833 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.61■□□□□ 0.25
CLIC3O95833 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.61■□□□□ 0.25
CLIC3O95833 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.61■□□□□ 0.25
CLIC3O95833 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLIC3O95833 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLIC3O95833 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLIC3O95833 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLIC3O95833 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.61■□□□□ 0.25
CLIC3O95833 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLIC3O95833 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
CLIC3O95833 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLIC3O95833 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLIC3O95833 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLIC3O95833 CROCCP1-201ENST00000426910 5675 ntBASIC16.61■□□□□ 0.25
CLIC3O95833 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLIC3O95833 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLIC3O95833 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLIC3O95833 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.61■□□□□ 0.25
CLIC3O95833 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CLIC3O95833 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLIC3O95833 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLIC3O95833 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.61■□□□□ 0.25
CLIC3O95833 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLIC3O95833 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLIC3O95833 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.6■□□□□ 0.25
CLIC3O95833 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLIC3O95833 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLIC3O95833 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLIC3O95833 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLIC3O95833 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLIC3O95833 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLIC3O95833 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CLIC3O95833 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CLIC3O95833 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLIC3O95833 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLIC3O95833 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLIC3O95833 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLIC3O95833 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLIC3O95833 MIR564-202ENST00000385049 94 ntBASIC16.6■□□□□ 0.25
CLIC3O95833 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLIC3O95833 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.6■□□□□ 0.25
CLIC3O95833 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLIC3O95833 PRKY-204ENST00000533551 1019 ntBASIC16.6■□□□□ 0.25
CLIC3O95833 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.6■□□□□ 0.25
CLIC3O95833 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLIC3O95833 AC004264.1-201ENST00000608354 794 ntBASIC16.6■□□□□ 0.25
CLIC3O95833 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.6■□□□□ 0.25
CLIC3O95833 MYC-209ENST00000641252 345 ntBASIC16.6■□□□□ 0.25
CLIC3O95833 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLIC3O95833 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms