Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GDF9O60383 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.42■□□□□ 0.38
GDF9O60383 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.42■□□□□ 0.38
GDF9O60383 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
GDF9O60383 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
GDF9O60383 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GDF9O60383 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GDF9O60383 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GDF9O60383 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.42■□□□□ 0.38
GDF9O60383 AC007967.3-201ENST00000434308 558 ntBASIC17.42■□□□□ 0.38
GDF9O60383 PRYP5-201ENST00000451909 266 ntBASIC17.42■□□□□ 0.38
GDF9O60383 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.42■□□□□ 0.38
GDF9O60383 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
GDF9O60383 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.42■□□□□ 0.38
GDF9O60383 AP000344.2-201ENST00000512987 629 ntBASIC17.42■□□□□ 0.38
GDF9O60383 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.42■□□□□ 0.38
GDF9O60383 AC069262.1-201ENST00000539058 672 ntBASIC17.42■□□□□ 0.38
GDF9O60383 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.42■□□□□ 0.38
GDF9O60383 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.42■□□□□ 0.38
GDF9O60383 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.42■□□□□ 0.38
GDF9O60383 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.42■□□□□ 0.38
GDF9O60383 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GDF9O60383 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GDF9O60383 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GDF9O60383 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.42■□□□□ 0.38
GDF9O60383 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
GDF9O60383 AL499627.1-201ENST00000569373 2188 ntBASIC17.42■□□□□ 0.38
GDF9O60383 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GDF9O60383 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GDF9O60383 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDF9O60383 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
GDF9O60383 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDF9O60383 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.41■□□□□ 0.38
GDF9O60383 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDF9O60383 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.41■□□□□ 0.38
GDF9O60383 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDF9O60383 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDF9O60383 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
GDF9O60383 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GDF9O60383 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.41■□□□□ 0.38
GDF9O60383 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.41■□□□□ 0.38
GDF9O60383 ELK2BP-201ENST00000415014 1224 ntBASIC17.41■□□□□ 0.38
GDF9O60383 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.41■□□□□ 0.38
GDF9O60383 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.41■□□□□ 0.38
GDF9O60383 AC015922.1-201ENST00000421102 1152 ntBASIC17.41■□□□□ 0.38
GDF9O60383 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.41■□□□□ 0.38
GDF9O60383 KRT18P65-201ENST00000439811 1286 ntBASIC17.41■□□□□ 0.38
GDF9O60383 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDF9O60383 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GDF9O60383 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.41■□□□□ 0.38
GDF9O60383 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.41■□□□□ 0.38
GDF9O60383 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.41■□□□□ 0.38
GDF9O60383 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.41■□□□□ 0.38
GDF9O60383 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.41■□□□□ 0.38
GDF9O60383 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.41■□□□□ 0.38
GDF9O60383 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.41■□□□□ 0.38
GDF9O60383 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.41■□□□□ 0.38
GDF9O60383 AC004790.2-201ENST00000623588 572 ntBASIC17.41■□□□□ 0.38
GDF9O60383 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GDF9O60383 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDF9O60383 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
GDF9O60383 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GDF9O60383 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDF9O60383 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDF9O60383 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GDF9O60383 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDF9O60383 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.41■□□□□ 0.38
GDF9O60383 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
GDF9O60383 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDF9O60383 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDF9O60383 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GDF9O60383 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GDF9O60383 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.4■□□□□ 0.38
GDF9O60383 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
GDF9O60383 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDF9O60383 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GDF9O60383 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDF9O60383 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.4■□□□□ 0.38
GDF9O60383 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDF9O60383 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
GDF9O60383 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDF9O60383 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.4■□□□□ 0.38
GDF9O60383 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDF9O60383 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GDF9O60383 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.4■□□□□ 0.38
GDF9O60383 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.4■□□□□ 0.38
GDF9O60383 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.4■□□□□ 0.38
GDF9O60383 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
GDF9O60383 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.4■□□□□ 0.38
GDF9O60383 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
GDF9O60383 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
GDF9O60383 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDF9O60383 AC063926.2-201ENST00000623766 1308 ntBASIC17.4■□□□□ 0.38
GDF9O60383 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GDF9O60383 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GDF9O60383 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.4■□□□□ 0.38
GDF9O60383 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.4■□□□□ 0.38
GDF9O60383 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.4■□□□□ 0.38
GDF9O60383 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
GDF9O60383 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms