Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRAF3IP2O43734 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAF3IP2O43734 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAF3IP2O43734 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRAF3IP2O43734 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP2O43734 AC009154.2-201ENST00000621177 724 ntBASIC16.03■□□□□ 0.16
TRAF3IP2O43734 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAF3IP2O43734 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAF3IP2O43734 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP2O43734 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP2O43734 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRAF3IP2O43734 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAF3IP2O43734 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRAF3IP2O43734 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 Z83836.1-201ENST00000624605 1642 ntBASIC16.02■□□□□ 0.16
TRAF3IP2O43734 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 TSPY12P-201ENST00000421279 868 ntBASIC16.02■□□□□ 0.16
TRAF3IP2O43734 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 AL136038.3-201ENST00000561909 1096 ntBASIC16.02■□□□□ 0.16
TRAF3IP2O43734 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 AL121956.5-201ENST00000625261 221 ntBASIC16.02■□□□□ 0.16
TRAF3IP2O43734 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRAF3IP2O43734 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAF3IP2O43734 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAF3IP2O43734 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAF3IP2O43734 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAF3IP2O43734 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAF3IP2O43734 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.02■□□□□ 0.15
TRAF3IP2O43734 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAF3IP2O43734 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAF3IP2O43734 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.02■□□□□ 0.15
TRAF3IP2O43734 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAF3IP2O43734 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAF3IP2O43734 BCL2-203ENST00000589955 5011 ntBASIC16.02■□□□□ 0.15
TRAF3IP2O43734 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAF3IP2O43734 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
TRAF3IP2O43734 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 AC067852.2-201ENST00000590513 2313 ntBASIC16.01■□□□□ 0.15
TRAF3IP2O43734 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 MIR1224-201ENST00000408193 85 ntBASIC16.01■□□□□ 0.15
TRAF3IP2O43734 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 AL590326.2-201ENST00000625139 305 ntBASIC16.01■□□□□ 0.15
TRAF3IP2O43734 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP2O43734 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAF3IP2O43734 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAF3IP2O43734 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAF3IP2O43734 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16■□□□□ 0.15
TRAF3IP2O43734 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
TRAF3IP2O43734 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRAF3IP2O43734 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAF3IP2O43734 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16■□□□□ 0.15
TRAF3IP2O43734 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAF3IP2O43734 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAF3IP2O43734 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms