Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP2AO43633 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CHMP2AO43633 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.2■□□□□ 0.82
CHMP2AO43633 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CHMP2AO43633 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.2■□□□□ 0.82
CHMP2AO43633 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP2AO43633 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP2AO43633 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP2AO43633 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP2AO43633 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CHMP2AO43633 IGHV3-47-201ENST00000425060 335 ntBASIC20.2■□□□□ 0.82
CHMP2AO43633 AC246785.2-201ENST00000432512 513 ntBASIC20.2■□□□□ 0.82
CHMP2AO43633 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.2■□□□□ 0.82
CHMP2AO43633 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.2■□□□□ 0.82
CHMP2AO43633 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.2■□□□□ 0.82
CHMP2AO43633 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.2■□□□□ 0.82
CHMP2AO43633 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.2■□□□□ 0.82
CHMP2AO43633 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.2■□□□□ 0.82
CHMP2AO43633 AC005336.2-201ENST00000593183 939 ntBASIC20.2■□□□□ 0.82
CHMP2AO43633 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP2AO43633 AP000997.3-201ENST00000623333 2250 ntBASIC20.2■□□□□ 0.82
CHMP2AO43633 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP2AO43633 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP2AO43633 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.2■□□□□ 0.82
CHMP2AO43633 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP2AO43633 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.2■□□□□ 0.82
CHMP2AO43633 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP2AO43633 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2AO43633 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2AO43633 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2AO43633 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.19■□□□□ 0.82
CHMP2AO43633 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.19■□□□□ 0.82
CHMP2AO43633 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2AO43633 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2AO43633 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2AO43633 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2AO43633 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.19■□□□□ 0.82
CHMP2AO43633 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2AO43633 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2AO43633 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CHMP2AO43633 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2AO43633 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.19■□□□□ 0.82
CHMP2AO43633 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2AO43633 AL353801.3-201ENST00000609898 542 ntBASIC20.19■□□□□ 0.82
CHMP2AO43633 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.19■□□□□ 0.82
CHMP2AO43633 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CHMP2AO43633 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
CHMP2AO43633 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2AO43633 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2AO43633 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2AO43633 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2AO43633 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2AO43633 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2AO43633 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2AO43633 BICD1-207ENST00000551848 1962 ntBASIC20.19■□□□□ 0.82
CHMP2AO43633 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2AO43633 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.19■□□□□ 0.82
CHMP2AO43633 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.19■□□□□ 0.82
CHMP2AO43633 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2AO43633 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2AO43633 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2AO43633 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2AO43633 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2AO43633 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2AO43633 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2AO43633 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2AO43633 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CHMP2AO43633 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2AO43633 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.18■□□□□ 0.82
CHMP2AO43633 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CHMP2AO43633 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2AO43633 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CHMP2AO43633 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CHMP2AO43633 NUS1P2-201ENST00000417358 873 ntBASIC20.18■□□□□ 0.82
CHMP2AO43633 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CHMP2AO43633 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.18■□□□□ 0.82
CHMP2AO43633 KRT126P-201ENST00000549467 1181 ntBASIC20.18■□□□□ 0.82
CHMP2AO43633 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.18■□□□□ 0.82
CHMP2AO43633 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.18■□□□□ 0.82
CHMP2AO43633 AL732292.2-201ENST00000609649 430 ntBASIC20.18■□□□□ 0.82
CHMP2AO43633 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2AO43633 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2AO43633 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2AO43633 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2AO43633 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CHMP2AO43633 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CHMP2AO43633 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2AO43633 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.18■□□□□ 0.82
CHMP2AO43633 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2AO43633 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.18■□□□□ 0.82
CHMP2AO43633 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
CHMP2AO43633 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2AO43633 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2AO43633 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.17■□□□□ 0.82
CHMP2AO43633 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP2AO43633 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP2AO43633 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.17■□□□□ 0.82
CHMP2AO43633 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.17■□□□□ 0.82
CHMP2AO43633 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CHMP2AO43633 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms