Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.43■■□□□ 1.02
FOXN1O15353 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.43■■□□□ 1.02
FOXN1O15353 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
FOXN1O15353 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.43■■□□□ 1.02
FOXN1O15353 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
FOXN1O15353 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXN1O15353 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXN1O15353 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.43■■□□□ 1.02
FOXN1O15353 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.43■■□□□ 1.02
FOXN1O15353 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXN1O15353 WIZP1-201ENST00000531444 2299 ntBASIC21.43■■□□□ 1.02
FOXN1O15353 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXN1O15353 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.42■■□□□ 1.02
FOXN1O15353 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXN1O15353 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXN1O15353 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXN1O15353 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXN1O15353 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXN1O15353 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXN1O15353 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXN1O15353 CD99-202ENST00000381180 530 ntTSL 2 BASIC21.42■■□□□ 1.02
FOXN1O15353 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
FOXN1O15353 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.42■■□□□ 1.02
FOXN1O15353 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
FOXN1O15353 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXN1O15353 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC21.42■■□□□ 1.02
FOXN1O15353 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.42■■□□□ 1.02
FOXN1O15353 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXN1O15353 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC21.42■■□□□ 1.02
FOXN1O15353 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.42■■□□□ 1.02
FOXN1O15353 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC21.42■■□□□ 1.02
FOXN1O15353 AC104390.1-201ENST00000555663 520 ntBASIC21.42■■□□□ 1.02
FOXN1O15353 DUX4L17-201ENST00000557360 1267 ntBASIC21.42■■□□□ 1.02
FOXN1O15353 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC21.42■■□□□ 1.02
FOXN1O15353 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.42■■□□□ 1.02
FOXN1O15353 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXN1O15353 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
FOXN1O15353 AC093028.1-201ENST00000622998 982 ntBASIC21.42■■□□□ 1.02
FOXN1O15353 AC008735.5-201ENST00000623544 497 ntBASIC21.42■■□□□ 1.02
FOXN1O15353 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.42■■□□□ 1.02
FOXN1O15353 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
FOXN1O15353 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXN1O15353 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXN1O15353 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXN1O15353 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
FOXN1O15353 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
FOXN1O15353 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.41■■□□□ 1.02
FOXN1O15353 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.41■■□□□ 1.02
FOXN1O15353 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.41■■□□□ 1.02
FOXN1O15353 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXN1O15353 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXN1O15353 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.41■■□□□ 1.02
FOXN1O15353 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
FOXN1O15353 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXN1O15353 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXN1O15353 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.41■■□□□ 1.02
FOXN1O15353 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.41■■□□□ 1.02
FOXN1O15353 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
FOXN1O15353 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
FOXN1O15353 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
FOXN1O15353 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.41■■□□□ 1.02
FOXN1O15353 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
FOXN1O15353 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
FOXN1O15353 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
FOXN1O15353 INIP-202ENST00000374236 874 ntTSL 2 BASIC21.41■■□□□ 1.02
FOXN1O15353 ATP6V0CP3-201ENST00000417255 467 ntBASIC21.41■■□□□ 1.02
FOXN1O15353 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.41■■□□□ 1.02
FOXN1O15353 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
FOXN1O15353 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC21.41■■□□□ 1.02
FOXN1O15353 MIR4745-201ENST00000577608 62 ntBASIC21.41■■□□□ 1.02
FOXN1O15353 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
FOXN1O15353 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC21.41■■□□□ 1.02
FOXN1O15353 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXN1O15353 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
FOXN1O15353 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.41■■□□□ 1.02
FOXN1O15353 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXN1O15353 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.41■■□□□ 1.02
FOXN1O15353 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXN1O15353 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXN1O15353 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXN1O15353 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXN1O15353 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
FOXN1O15353 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXN1O15353 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
FOXN1O15353 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
FOXN1O15353 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
FOXN1O15353 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXN1O15353 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXN1O15353 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.4■■□□□ 1.02
FOXN1O15353 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
FOXN1O15353 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXN1O15353 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
FOXN1O15353 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
FOXN1O15353 METTL26-204ENST00000397665 558 ntTSL 2 BASIC21.4■■□□□ 1.02
FOXN1O15353 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC21.4■■□□□ 1.02
FOXN1O15353 AC015922.1-201ENST00000421102 1152 ntBASIC21.4■■□□□ 1.02
FOXN1O15353 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC21.4■■□□□ 1.02
FOXN1O15353 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC21.4■■□□□ 1.02
FOXN1O15353 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.4■■□□□ 1.02
FOXN1O15353 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms