Protein–RNA interactions for Protein: O15321

TM9SF1, Transmembrane 9 superfamily member 1, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1O15321 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM9SF1O15321 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM9SF1O15321 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM9SF1O15321 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM9SF1O15321 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM9SF1O15321 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TM9SF1O15321 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.87■□□□□ 0.45
TM9SF1O15321 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM9SF1O15321 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF1O15321 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TM9SF1O15321 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF1O15321 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF1O15321 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TM9SF1O15321 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF1O15321 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF1O15321 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.86■□□□□ 0.45
TM9SF1O15321 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF1O15321 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF1O15321 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF1O15321 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.86■□□□□ 0.45
TM9SF1O15321 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TM9SF1O15321 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.86■□□□□ 0.45
TM9SF1O15321 AL355802.2-201ENST00000402069 882 ntBASIC17.86■□□□□ 0.45
TM9SF1O15321 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.86■□□□□ 0.45
TM9SF1O15321 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.86■□□□□ 0.45
TM9SF1O15321 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.86■□□□□ 0.45
TM9SF1O15321 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF1O15321 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.86■□□□□ 0.45
TM9SF1O15321 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF1O15321 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF1O15321 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.86■□□□□ 0.45
TM9SF1O15321 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.86■□□□□ 0.45
TM9SF1O15321 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF1O15321 SLC25A1P4-201ENST00000567977 778 ntBASIC17.86■□□□□ 0.45
TM9SF1O15321 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF1O15321 LINC01451-201ENST00000623792 534 ntBASIC17.86■□□□□ 0.45
TM9SF1O15321 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.86■□□□□ 0.45
TM9SF1O15321 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TM9SF1O15321 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF1O15321 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.86■□□□□ 0.45
TM9SF1O15321 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.86■□□□□ 0.45
TM9SF1O15321 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF1O15321 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF1O15321 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.86■□□□□ 0.45
TM9SF1O15321 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF1O15321 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF1O15321 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF1O15321 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
TM9SF1O15321 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF1O15321 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF1O15321 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.85■□□□□ 0.45
TM9SF1O15321 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.85■□□□□ 0.45
TM9SF1O15321 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF1O15321 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TM9SF1O15321 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF1O15321 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF1O15321 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF1O15321 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.85■□□□□ 0.45
TM9SF1O15321 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF1O15321 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.85■□□□□ 0.45
TM9SF1O15321 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF1O15321 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.85■□□□□ 0.45
TM9SF1O15321 ESRRAP1-201ENST00000400596 1257 ntBASIC17.85■□□□□ 0.45
TM9SF1O15321 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.85■□□□□ 0.45
TM9SF1O15321 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.85■□□□□ 0.45
TM9SF1O15321 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF1O15321 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF1O15321 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.85■□□□□ 0.45
TM9SF1O15321 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF1O15321 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TM9SF1O15321 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.85■□□□□ 0.45
TM9SF1O15321 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.85■□□□□ 0.45
TM9SF1O15321 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
TM9SF1O15321 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TM9SF1O15321 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF1O15321 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF1O15321 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF1O15321 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF1O15321 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF1O15321 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF1O15321 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TM9SF1O15321 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF1O15321 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF1O15321 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF1O15321 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF1O15321 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF1O15321 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF1O15321 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF1O15321 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.84■□□□□ 0.45
TM9SF1O15321 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF1O15321 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.84■□□□□ 0.45
TM9SF1O15321 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF1O15321 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.84■□□□□ 0.45
TM9SF1O15321 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.84■□□□□ 0.45
TM9SF1O15321 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF1O15321 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.84■□□□□ 0.45
TM9SF1O15321 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.84■□□□□ 0.45
TM9SF1O15321 AC104390.1-201ENST00000555663 520 ntBASIC17.84■□□□□ 0.45
TM9SF1O15321 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF1O15321 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms