Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AC006058.3-201ENST00000606217 1069 ntBASIC12.33□□□□□ -0.44
NDUFA1O15239 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
NDUFA1O15239 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
NDUFA1O15239 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC12.33□□□□□ -0.44
NDUFA1O15239 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFA1O15239 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFA1O15239 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFA1O15239 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFA1O15239 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFA1O15239 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFA1O15239 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
NDUFA1O15239 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFA1O15239 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFA1O15239 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFA1O15239 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFA1O15239 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFA1O15239 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC12.33□□□□□ -0.44
NDUFA1O15239 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
NDUFA1O15239 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFA1O15239 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
NDUFA1O15239 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFA1O15239 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC12.33□□□□□ -0.44
NDUFA1O15239 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
NDUFA1O15239 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFA1O15239 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFA1O15239 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFA1O15239 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFA1O15239 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC12.33□□□□□ -0.44
NDUFA1O15239 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.33□□□□□ -0.44
NDUFA1O15239 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC12.32□□□□□ -0.44
NDUFA1O15239 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC12.32□□□□□ -0.44
NDUFA1O15239 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
NDUFA1O15239 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC12.32□□□□□ -0.44
NDUFA1O15239 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC12.32□□□□□ -0.44
NDUFA1O15239 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC12.32□□□□□ -0.44
NDUFA1O15239 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
NDUFA1O15239 AL138688.1-201ENST00000624851 1594 ntBASIC12.32□□□□□ -0.44
NDUFA1O15239 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
NDUFA1O15239 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC12.32□□□□□ -0.44
NDUFA1O15239 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 AC011298.2-201ENST00000617989 482 ntBASIC12.32□□□□□ -0.44
NDUFA1O15239 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC12.32□□□□□ -0.44
NDUFA1O15239 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
NDUFA1O15239 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC12.32□□□□□ -0.44
NDUFA1O15239 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.32□□□□□ -0.44
NDUFA1O15239 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC12.32□□□□□ -0.44
NDUFA1O15239 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
NDUFA1O15239 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFA1O15239 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
NDUFA1O15239 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFA1O15239 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFA1O15239 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFA1O15239 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFA1O15239 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFA1O15239 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFA1O15239 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
NDUFA1O15239 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
NDUFA1O15239 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
NDUFA1O15239 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFA1O15239 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
NDUFA1O15239 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
NDUFA1O15239 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFA1O15239 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
NDUFA1O15239 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
NDUFA1O15239 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFA1O15239 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFA1O15239 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFA1O15239 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFA1O15239 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFA1O15239 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms