Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
AP3D1O14617 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
AP3D1O14617 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.84■□□□□ 0.29
AP3D1O14617 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.84■□□□□ 0.29
AP3D1O14617 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.84■□□□□ 0.29
AP3D1O14617 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
AP3D1O14617 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
AP3D1O14617 SDHAP2-201ENST00000455183 2001 ntBASIC16.84■□□□□ 0.29
AP3D1O14617 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.84■□□□□ 0.29
AP3D1O14617 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.84■□□□□ 0.29
AP3D1O14617 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
AP3D1O14617 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3D1O14617 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3D1O14617 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3D1O14617 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3D1O14617 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3D1O14617 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3D1O14617 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3D1O14617 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.83■□□□□ 0.28
AP3D1O14617 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.83■□□□□ 0.28
AP3D1O14617 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3D1O14617 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP3D1O14617 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.83■□□□□ 0.28
AP3D1O14617 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.83■□□□□ 0.28
AP3D1O14617 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP3D1O14617 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3D1O14617 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP3D1O14617 AC112497.1-201ENST00000624824 639 ntBASIC16.83■□□□□ 0.28
AP3D1O14617 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3D1O14617 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3D1O14617 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3D1O14617 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
AP3D1O14617 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
AP3D1O14617 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3D1O14617 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
AP3D1O14617 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP3D1O14617 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP3D1O14617 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP3D1O14617 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.82■□□□□ 0.28
AP3D1O14617 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.82■□□□□ 0.28
AP3D1O14617 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.82■□□□□ 0.28
AP3D1O14617 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
AP3D1O14617 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.82■□□□□ 0.28
AP3D1O14617 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
AP3D1O14617 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.82■□□□□ 0.28
AP3D1O14617 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.82■□□□□ 0.28
AP3D1O14617 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.82■□□□□ 0.28
AP3D1O14617 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.82■□□□□ 0.28
AP3D1O14617 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.82■□□□□ 0.28
AP3D1O14617 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.82■□□□□ 0.28
AP3D1O14617 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
AP3D1O14617 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.82■□□□□ 0.28
AP3D1O14617 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
AP3D1O14617 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3D1O14617 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
AP3D1O14617 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3D1O14617 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms