Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 TPM4P1-201ENST00000436100 807 ntBASIC20.2■□□□□ 0.82
DDX39AO00148 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.2■□□□□ 0.82
DDX39AO00148 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DDX39AO00148 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.2■□□□□ 0.82
DDX39AO00148 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.2■□□□□ 0.82
DDX39AO00148 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.2■□□□□ 0.82
DDX39AO00148 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
DDX39AO00148 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX39AO00148 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX39AO00148 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.2■□□□□ 0.82
DDX39AO00148 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX39AO00148 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.2■□□□□ 0.82
DDX39AO00148 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX39AO00148 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.2■□□□□ 0.82
DDX39AO00148 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.2■□□□□ 0.82
DDX39AO00148 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
DDX39AO00148 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.19■□□□□ 0.82
DDX39AO00148 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
DDX39AO00148 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.19■□□□□ 0.82
DDX39AO00148 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
DDX39AO00148 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.19■□□□□ 0.82
DDX39AO00148 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
DDX39AO00148 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.19■□□□□ 0.82
DDX39AO00148 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.19■□□□□ 0.82
DDX39AO00148 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
DDX39AO00148 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.19■□□□□ 0.82
DDX39AO00148 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
DDX39AO00148 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX39AO00148 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
DDX39AO00148 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
DDX39AO00148 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX39AO00148 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.18■□□□□ 0.82
DDX39AO00148 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX39AO00148 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.18■□□□□ 0.82
DDX39AO00148 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DDX39AO00148 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DDX39AO00148 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DDX39AO00148 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX39AO00148 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX39AO00148 AC004870.1-201ENST00000315132 882 ntBASIC20.18■□□□□ 0.82
DDX39AO00148 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX39AO00148 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
DDX39AO00148 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX39AO00148 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.18■□□□□ 0.82
DDX39AO00148 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
DDX39AO00148 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX39AO00148 RCN1P2-201ENST00000398357 915 ntBASIC20.18■□□□□ 0.82
DDX39AO00148 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.18■□□□□ 0.82
DDX39AO00148 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.18■□□□□ 0.82
DDX39AO00148 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.18■□□□□ 0.82
DDX39AO00148 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX39AO00148 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
DDX39AO00148 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
DDX39AO00148 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DDX39AO00148 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.18■□□□□ 0.82
DDX39AO00148 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX39AO00148 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
DDX39AO00148 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DDX39AO00148 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.18■□□□□ 0.82
DDX39AO00148 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX39AO00148 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX39AO00148 TP73-AS1-210ENST00000637775 1455 ntBASIC20.18■□□□□ 0.82
DDX39AO00148 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX39AO00148 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
DDX39AO00148 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX39AO00148 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DDX39AO00148 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX39AO00148 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.17■□□□□ 0.82
DDX39AO00148 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX39AO00148 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DDX39AO00148 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX39AO00148 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DDX39AO00148 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DDX39AO00148 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms