Protein–RNA interactions for Protein: J3QQQ9

Uncharacterized protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
J3QQQ9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
J3QQQ9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
J3QQQ9 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.4□□□□□ -0.42
J3QQQ9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
J3QQQ9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
J3QQQ9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
J3QQQ9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
J3QQQ9 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
J3QQQ9 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.4□□□□□ -0.42
J3QQQ9 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.4□□□□□ -0.42
J3QQQ9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
J3QQQ9 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
J3QQQ9 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
J3QQQ9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
J3QQQ9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
J3QQQ9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
J3QQQ9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC12.4□□□□□ -0.42
J3QQQ9 DBI-210ENST00000542275 757 ntTSL 5 BASIC12.4□□□□□ -0.42
J3QQQ9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
J3QQQ9 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC12.4□□□□□ -0.42
J3QQQ9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
J3QQQ9 AC092437.1-201ENST00000624794 1048 ntBASIC12.4□□□□□ -0.42
J3QQQ9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC12.4□□□□□ -0.42
J3QQQ9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
J3QQQ9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
J3QQQ9 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
J3QQQ9 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
J3QQQ9 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
J3QQQ9 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
J3QQQ9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
J3QQQ9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC12.4□□□□□ -0.42
J3QQQ9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
J3QQQ9 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
J3QQQ9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
J3QQQ9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
J3QQQ9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.4□□□□□ -0.42
J3QQQ9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC12.4□□□□□ -0.42
J3QQQ9 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
J3QQQ9 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
J3QQQ9 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
J3QQQ9 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
J3QQQ9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
J3QQQ9 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC12.39□□□□□ -0.43
J3QQQ9 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12.39□□□□□ -0.43
J3QQQ9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
J3QQQ9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
J3QQQ9 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
J3QQQ9 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
J3QQQ9 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
J3QQQ9 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
J3QQQ9 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
J3QQQ9 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC12.39□□□□□ -0.43
J3QQQ9 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
J3QQQ9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
J3QQQ9 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
J3QQQ9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
J3QQQ9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
J3QQQ9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
J3QQQ9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC12.39□□□□□ -0.43
J3QQQ9 AP000593.1-201ENST00000393668 712 ntBASIC12.39□□□□□ -0.43
J3QQQ9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
J3QQQ9 AL512625.2-201ENST00000417533 625 ntBASIC12.39□□□□□ -0.43
J3QQQ9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC12.39□□□□□ -0.43
J3QQQ9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC12.39□□□□□ -0.43
J3QQQ9 DUX4L16-201ENST00000555130 1264 ntBASIC12.39□□□□□ -0.43
J3QQQ9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC12.39□□□□□ -0.43
J3QQQ9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC12.39□□□□□ -0.43
J3QQQ9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC12.39□□□□□ -0.43
J3QQQ9 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
J3QQQ9 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.39□□□□□ -0.43
J3QQQ9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
J3QQQ9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
J3QQQ9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
J3QQQ9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
J3QQQ9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
J3QQQ9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.39□□□□□ -0.43
J3QQQ9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC12.39□□□□□ -0.43
J3QQQ9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
J3QQQ9 F11R-206ENST00000621309 4770 ntTSL 5 BASIC12.39□□□□□ -0.43
J3QQQ9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
J3QQQ9 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC12.39□□□□□ -0.43
J3QQQ9 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
J3QQQ9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
J3QQQ9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
J3QQQ9 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
J3QQQ9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
J3QQQ9 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
J3QQQ9 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
J3QQQ9 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
J3QQQ9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
J3QQQ9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
J3QQQ9 KRT8P41-201ENST00000533985 1514 ntBASIC12.38□□□□□ -0.43
J3QQQ9 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.38□□□□□ -0.43
J3QQQ9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
J3QQQ9 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
J3QQQ9 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
J3QQQ9 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.38□□□□□ -0.43
J3QQQ9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
J3QQQ9 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
J3QQQ9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms