Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NACAE9PAV3 AC134043.2-201ENST00000624206 2238 ntBASIC13.17□□□□□ -0.3
NACAE9PAV3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NACAE9PAV3 PCDHB18P-201ENST00000524813 2368 ntBASIC13.17□□□□□ -0.3
NACAE9PAV3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.17□□□□□ -0.3
NACAE9PAV3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NACAE9PAV3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NACAE9PAV3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NACAE9PAV3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC13.17□□□□□ -0.3
NACAE9PAV3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NACAE9PAV3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.17□□□□□ -0.3
NACAE9PAV3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
NACAE9PAV3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NACAE9PAV3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NACAE9PAV3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NACAE9PAV3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.17□□□□□ -0.3
NACAE9PAV3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NACAE9PAV3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NACAE9PAV3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC13.17□□□□□ -0.3
NACAE9PAV3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.17□□□□□ -0.3
NACAE9PAV3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NACAE9PAV3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NACAE9PAV3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
NACAE9PAV3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NACAE9PAV3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.16□□□□□ -0.3
NACAE9PAV3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NACAE9PAV3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NACAE9PAV3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NACAE9PAV3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NACAE9PAV3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NACAE9PAV3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NACAE9PAV3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NACAE9PAV3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NACAE9PAV3 AL137013.1-201ENST00000432946 1228 ntBASIC13.16□□□□□ -0.3
NACAE9PAV3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NACAE9PAV3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NACAE9PAV3 AC063952.2-201ENST00000498792 1227 ntBASIC13.16□□□□□ -0.3
NACAE9PAV3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.16□□□□□ -0.3
NACAE9PAV3 EGLN1P1-201ENST00000531623 762 ntBASIC13.16□□□□□ -0.3
NACAE9PAV3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NACAE9PAV3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NACAE9PAV3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.16□□□□□ -0.3
NACAE9PAV3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NACAE9PAV3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
NACAE9PAV3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NACAE9PAV3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.16□□□□□ -0.3
NACAE9PAV3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NACAE9PAV3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.16□□□□□ -0.3
NACAE9PAV3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NACAE9PAV3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NACAE9PAV3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.16□□□□□ -0.3
NACAE9PAV3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NACAE9PAV3 AC079328.2-201ENST00000561241 3354 ntBASIC13.16□□□□□ -0.3
NACAE9PAV3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.16□□□□□ -0.3
NACAE9PAV3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NACAE9PAV3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.16□□□□□ -0.3
NACAE9PAV3 MCCD1P1-208ENST00000445732 328 ntBASIC13.16□□□□□ -0.3
NACAE9PAV3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
NACAE9PAV3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.16□□□□□ -0.3
NACAE9PAV3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.16□□□□□ -0.3
NACAE9PAV3 MIR3180-5-201ENST00000583743 153 ntBASIC13.16□□□□□ -0.3
NACAE9PAV3 AC010653.2-201ENST00000623505 997 ntBASIC13.16□□□□□ -0.3
NACAE9PAV3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NACAE9PAV3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
NACAE9PAV3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NACAE9PAV3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
NACAE9PAV3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.15□□□□□ -0.3
NACAE9PAV3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
NACAE9PAV3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13.15□□□□□ -0.3
NACAE9PAV3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NACAE9PAV3 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.15□□□□□ -0.3
NACAE9PAV3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NACAE9PAV3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NACAE9PAV3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NACAE9PAV3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NACAE9PAV3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NACAE9PAV3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.15□□□□□ -0.3
NACAE9PAV3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.15□□□□□ -0.3
NACAE9PAV3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC13.15□□□□□ -0.3
NACAE9PAV3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
NACAE9PAV3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NACAE9PAV3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC13.15□□□□□ -0.3
NACAE9PAV3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NACAE9PAV3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
NACAE9PAV3 CCR12P-201ENST00000446203 998 ntBASIC13.15□□□□□ -0.3
NACAE9PAV3 ATP5G1P1-201ENST00000448724 379 ntBASIC13.15□□□□□ -0.3
NACAE9PAV3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NACAE9PAV3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.15□□□□□ -0.3
NACAE9PAV3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.15□□□□□ -0.3
NACAE9PAV3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
NACAE9PAV3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
NACAE9PAV3 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
NACAE9PAV3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.15□□□□□ -0.3
NACAE9PAV3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.15□□□□□ -0.3
NACAE9PAV3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NACAE9PAV3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NACAE9PAV3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NACAE9PAV3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.15□□□□□ -0.3
NACAE9PAV3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NACAE9PAV3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.15□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms