Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 AL138781.2-201ENST00000617896 1843 ntBASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 AC246785.2-201ENST00000432512 513 ntBASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 KRT18P65-201ENST00000439811 1286 ntBASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 NUS1P1-201ENST00000446295 882 ntBASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 SKP2-204ENST00000508514 821 ntTSL 3 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 FOSL1P1-201ENST00000511041 816 ntBASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 AL691432.3-201ENST00000621860 400 ntBASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 NSUN5P1-202ENST00000421140 1535 ntBASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 NSUN5P2-203ENST00000457352 1529 ntBASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IGHV4-28A0A0C4DH34 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 PHGDH-209ENST00000641074 1780 ntBASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 AL845331.1-201ENST00000424978 1190 ntBASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 AC068472.1-201ENST00000474589 881 ntBASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 AC091607.1-201ENST00000490318 1060 ntBASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 AP005901.3-202ENST00000581653 237 ntBASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC12.97□□□□□ -0.33
IGHV4-28A0A0C4DH34 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
IGHV4-28A0A0C4DH34 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms