Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAV19A0A0A6YYK7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAV19A0A0A6YYK7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV19A0A0A6YYK7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAV19A0A0A6YYK7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAV19A0A0A6YYK7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV19A0A0A6YYK7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV19A0A0A6YYK7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 AL356309.3-201ENST00000624132 1934 ntBASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV19A0A0A6YYK7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 AL139288.1-201ENST00000623748 933 ntBASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 KRT8P47-201ENST00000604727 1398 ntBASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV19A0A0A6YYK7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV19A0A0A6YYK7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV19A0A0A6YYK7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV19A0A0A6YYK7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV19A0A0A6YYK7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV19A0A0A6YYK7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAV19A0A0A6YYK7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV19A0A0A6YYK7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
TRAV19A0A0A6YYK7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV19A0A0A6YYK7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV19A0A0A6YYK7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAV19A0A0A6YYK7 SART3-203ENST00000546611 1184 ntBASIC18.52■□□□□ 0.56
TRAV19A0A0A6YYK7 AC021087.4-201ENST00000563761 564 ntBASIC18.52■□□□□ 0.56
TRAV19A0A0A6YYK7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.52■□□□□ 0.56
TRAV19A0A0A6YYK7 FAM215A-202ENST00000632077 792 ntBASIC18.52■□□□□ 0.56
TRAV19A0A0A6YYK7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAV19A0A0A6YYK7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV19A0A0A6YYK7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV19A0A0A6YYK7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV19A0A0A6YYK7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV19A0A0A6YYK7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV19A0A0A6YYK7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
TRAV19A0A0A6YYK7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV19A0A0A6YYK7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
TRAV19A0A0A6YYK7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
TRAV19A0A0A6YYK7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
TRAV19A0A0A6YYK7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV19A0A0A6YYK7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms