Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 FAM207BP-201ENST00000447172 505 ntBASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 AC008040.2-201ENST00000461049 708 ntBASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 AL138688.1-201ENST00000624851 1594 ntBASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 CROCCP2-202ENST00000412962 2773 ntBASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 MIR149-201ENST00000384879 89 ntBASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 AC233263.1-201ENST00000578059 224 ntBASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 AL118508.1-201ENST00000613502 2345 ntBASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRAV18A0A075B6X5 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 GPAT2P1-201ENST00000444924 1672 ntBASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 KSR1P1-201ENST00000446298 240 ntBASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV18A0A075B6X5 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms