Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
CDC42BPBQ9Y5S2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
CDC42BPBQ9Y5S2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CDC42BPBQ9Y5S2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC26.99■■□□□ 1.91
CDC42BPBQ9Y5S2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CDC42BPBQ9Y5S2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CDC42BPBQ9Y5S2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
CDC42BPBQ9Y5S2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CDC42BPBQ9Y5S2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
CDC42BPBQ9Y5S2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC26.99■■□□□ 1.91
CDC42BPBQ9Y5S2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC26.99■■□□□ 1.91
CDC42BPBQ9Y5S2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CDC42BPBQ9Y5S2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC26.99■■□□□ 1.91
CDC42BPBQ9Y5S2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC26.99■■□□□ 1.91
CDC42BPBQ9Y5S2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC26.98■■□□□ 1.91
CDC42BPBQ9Y5S2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CDC42BPBQ9Y5S2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC26.98■■□□□ 1.91
CDC42BPBQ9Y5S2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CDC42BPBQ9Y5S2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC26.98■■□□□ 1.91
CDC42BPBQ9Y5S2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CDC42BPBQ9Y5S2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC26.98■■□□□ 1.91
CDC42BPBQ9Y5S2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC26.98■■□□□ 1.91
CDC42BPBQ9Y5S2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC26.98■■□□□ 1.91
CDC42BPBQ9Y5S2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
CDC42BPBQ9Y5S2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC26.98■■□□□ 1.91
CDC42BPBQ9Y5S2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC26.98■■□□□ 1.91
CDC42BPBQ9Y5S2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CDC42BPBQ9Y5S2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC26.98■■□□□ 1.91
CDC42BPBQ9Y5S2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC26.98■■□□□ 1.91
CDC42BPBQ9Y5S2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC26.98■■□□□ 1.91
CDC42BPBQ9Y5S2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
CDC42BPBQ9Y5S2 AC073130.3-201ENST00000624389 2278 ntBASIC26.98■■□□□ 1.91
CDC42BPBQ9Y5S2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC26.97■■□□□ 1.91
CDC42BPBQ9Y5S2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC26.97■■□□□ 1.91
CDC42BPBQ9Y5S2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CDC42BPBQ9Y5S2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC26.97■■□□□ 1.91
CDC42BPBQ9Y5S2 CD82-202ENST00000342935 967 ntTSL 5 BASIC26.97■■□□□ 1.91
CDC42BPBQ9Y5S2 MRPL20P1-201ENST00000400819 433 ntBASIC26.97■■□□□ 1.91
CDC42BPBQ9Y5S2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDC42BPBQ9Y5S2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC26.97■■□□□ 1.91
CDC42BPBQ9Y5S2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC26.97■■□□□ 1.91
CDC42BPBQ9Y5S2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC26.97■■□□□ 1.91
CDC42BPBQ9Y5S2 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
CDC42BPBQ9Y5S2 SPCS2P1-201ENST00000561636 679 ntBASIC26.97■■□□□ 1.91
CDC42BPBQ9Y5S2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC26.97■■□□□ 1.91
CDC42BPBQ9Y5S2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC26.97■■□□□ 1.91
CDC42BPBQ9Y5S2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CDC42BPBQ9Y5S2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC26.97■■□□□ 1.91
CDC42BPBQ9Y5S2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDC42BPBQ9Y5S2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 TSEN15P1-201ENST00000423257 515 ntBASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 AL031432.2-201ENST00000566714 459 ntBASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 AL928711.1-201ENST00000570165 459 ntBASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
CDC42BPBQ9Y5S2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC26.95■■□□□ 1.91
CDC42BPBQ9Y5S2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
CDC42BPBQ9Y5S2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
CDC42BPBQ9Y5S2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.91
CDC42BPBQ9Y5S2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC26.95■■□□□ 1.9
CDC42BPBQ9Y5S2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
CDC42BPBQ9Y5S2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CDC42BPBQ9Y5S2 PC-214ENST00000628663 1470 ntTSL 5 BASIC26.95■■□□□ 1.9
CDC42BPBQ9Y5S2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC26.95■■□□□ 1.9
CDC42BPBQ9Y5S2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC26.95■■□□□ 1.9
CDC42BPBQ9Y5S2 AC004790.2-201ENST00000623588 572 ntBASIC26.95■■□□□ 1.9
CDC42BPBQ9Y5S2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC26.95■■□□□ 1.9
CDC42BPBQ9Y5S2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
CDC42BPBQ9Y5S2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CDC42BPBQ9Y5S2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC26.95■■□□□ 1.9
CDC42BPBQ9Y5S2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDC42BPBQ9Y5S2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC26.94■■□□□ 1.9
CDC42BPBQ9Y5S2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDC42BPBQ9Y5S2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDC42BPBQ9Y5S2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDC42BPBQ9Y5S2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CDC42BPBQ9Y5S2 AC003669.1-201ENST00000334569 611 ntBASIC26.94■■□□□ 1.9
CDC42BPBQ9Y5S2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC26.94■■□□□ 1.9
CDC42BPBQ9Y5S2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC26.94■■□□□ 1.9
CDC42BPBQ9Y5S2 KRT19P2-202ENST00000557173 1012 ntBASIC26.94■■□□□ 1.9
CDC42BPBQ9Y5S2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDC42BPBQ9Y5S2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC26.94■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms