Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.28■□□□□ 0.52
PCDHB9Q9Y5E1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHB9Q9Y5E1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHB9Q9Y5E1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB9Q9Y5E1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
PCDHB9Q9Y5E1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHB9Q9Y5E1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCDHB9Q9Y5E1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.28■□□□□ 0.52
PCDHB9Q9Y5E1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PCDHB9Q9Y5E1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHB9Q9Y5E1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB9Q9Y5E1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB9Q9Y5E1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB9Q9Y5E1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHB9Q9Y5E1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB9Q9Y5E1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHB9Q9Y5E1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PCDHB9Q9Y5E1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB9Q9Y5E1 BICD1-207ENST00000551848 1962 ntBASIC18.28■□□□□ 0.52
PCDHB9Q9Y5E1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB9Q9Y5E1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB9Q9Y5E1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 AP002469.2-201ENST00000531724 424 ntBASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB9Q9Y5E1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.51
PCDHB9Q9Y5E1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB9Q9Y5E1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB9Q9Y5E1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 AL121912.1-201ENST00000603683 238 ntBASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 AC138894.3-201ENST00000603787 634 ntBASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 AC120114.3-201ENST00000611923 658 ntBASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 IGHV3-41-201ENST00000613121 348 ntBASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 AC117500.6-201ENST00000624871 588 ntBASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB9Q9Y5E1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PCDHB9Q9Y5E1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB9Q9Y5E1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB9Q9Y5E1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB9Q9Y5E1 REXO1L9P-201ENST00000604264 2108 ntBASIC18.25■□□□□ 0.51
PCDHB9Q9Y5E1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB9Q9Y5E1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB9Q9Y5E1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHB9Q9Y5E1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB9Q9Y5E1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB9Q9Y5E1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB9Q9Y5E1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB9Q9Y5E1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDHB9Q9Y5E1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHB9Q9Y5E1 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms